Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q3M5C9    625   RPOC1_ANAVT DNA-directed RNA polymerase subun...5601e-40     165     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
662A2BT60    634   RPOC1_PROMS DNA-directed RNA polymerase subun...4981e-40     165     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
663A8G6Y5    634   RPOC1_PROM2 DNA-directed RNA polymerase subun...4901e-40     164     27     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
664Q6B8R7    628   RPOC1_GRATL DNA-directed RNA polymerase subun...3202e-40     164     33     51GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
665Q28UX6    1404   RPOC_JANSC DNA-directed RNA polymerase subuni...1450.002     47     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
666A9BF32    1643   RPOC_PETMO DNA-directed RNA polymerase subuni...510.043     42.4     37     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
667A1ALT5    1409   RPOC_PELPD DNA-directed RNA polymerase subuni...1440.004     45.8     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
668A3PEX3    634   RPOC1_PROM0 DNA-directed RNA polymerase subun...4982e-40     164     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
669Q3AZA3    634   RPOC1_SYNS9 DNA-directed RNA polymerase subun...4902e-40     164     26     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
670Q3AHX6    634   RPOC1_SYNSC DNA-directed RNA polymerase subun...4902e-40     164     27     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
671A9BCH5    633   RPOC1_PROM4 DNA-directed RNA polymerase subun...5162e-40     164     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
672Q2YB04    1408   RPOC_NITMU DNA-directed RNA polymerase subuni...1460.0009     48.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
673B2Y1V6    696   RPOC1_WELMI DNA-directed RNA polymerase subun...3152e-40     164     36     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
674A2BYL0    634   RPOC1_PROM5 DNA-directed RNA polymerase subun...4973e-40     164     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
675Q7V007    634   RPOC1_PROMP DNA-directed RNA polymerase subun...4973e-40     164     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
676Q19V99    717   RPOC1_CHLAT DNA-directed RNA polymerase subun...4863e-40     164     29     45GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
677A0T0D8    696   RPOC1_PHATC DNA-directed RNA polymerase subun...3114e-40     164     34     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
678A6MVX3    623   RPOC1_RHDSA DNA-directed RNA polymerase subun...3084e-40     163     33     50GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
679B5ZAZ4    1305   RPOC_UREU1 DNA-directed RNA polymerase subuni...1610.007     45.1     24     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
680B3E7S9    1385   RPOC_GEOLS DNA-directed RNA polymerase subuni...1440.0002     50.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
681A8G1F4    1405   RPOC_SHESH DNA-directed RNA polymerase subuni...400.013     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
682B3PK31    1407   RPOC_CELJU DNA-directed RNA polymerase subuni...1440.002     47     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
683Q9PQV5    1305   RPOC_UREPA DNA-directed RNA polymerase subuni...1610.008     45.1     24     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
684B1AIH6    1305   RPOC_UREP2 DNA-directed RNA polymerase subuni...1610.008     45.1     24     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
685B0TM18    1404   RPOC_SHEHH DNA-directed RNA polymerase subuni...1920.008     44.7     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
686Q82T76    1404   RPOC_NITEU DNA-directed RNA polymerase subuni...1670.002     47     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
687P94899    989   RPOC_LEUPS DNA-directed RNA polymerase subuni...1920.000001     57.4     26     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
688A7HWQ5    1397   RPOC_PARL1 DNA-directed RNA polymerase subuni...1460.0003     49.7     27     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
689Q318Q8    634   RPOC1_PROM9 DNA-directed RNA polymerase subun...4986e-40     162     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
690A8GYX0    1404   RPOC_SHEPA DNA-directed RNA polymerase subuni...400.013     44.3     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
691A7NJM0    1502   RPOC_ROSCS DNA-directed RNA polymerase subuni...430.007     45.1     44     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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