Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631P14563    621   RPOC1_NOSCO DNA-directed RNA polymerase subun...5498e-42     169     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
632Q2W2I2    1496   RPOC_MAGSA DNA-directed RNA polymerase subuni...350.00005     52     63     77
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
633Q7V5P2    634   RPOC1_PROMM DNA-directed RNA polymerase subun...4988e-42     169     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
634A1B017    1402   RPOC_PARDP DNA-directed RNA polymerase subuni...1450.001     47.4     28     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
635Q110H2    672   RPOC1_TRIEI DNA-directed RNA polymerase subun...5611e-41     169     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
636B6YPZ6    1405   RPOC_AZOPC DNA-directed RNA polymerase subuni...590.067     42     37     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
637B1X3M9    643   RPOC1_PAUCH DNA-directed RNA polymerase subun...4911e-41     168     27     46GO:0070111; C:organellar chromatophore; IEA:UniProtKB-SubCell.::GO:0009536; C:plastid; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
638Q1J0P7    1537   RPOC_DEIGD DNA-directed RNA polymerase subuni...1900.002     47     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
639P42076    634   RPOC1_PROMA DNA-directed RNA polymerase subun...4902e-41     167     27     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
640Q7U8K3    634   RPOC1_SYNPX DNA-directed RNA polymerase subun...4903e-41     167     27     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
641Q2JJ18    627   RPOC1_SYNJB DNA-directed RNA polymerase subun...3273e-41     167     34     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
642P19176    1398   RPOC_PSEPU DNA-directed RNA polymerase subuni...1790.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
643A5GVF1    634   RPOC1_SYNR3 DNA-directed RNA polymerase subun...4903e-41     167     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
644A9GRB4    1427   RPOC_SORC5 DNA-directed RNA polymerase subuni...1350.001     48.1     29     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
645P77917    1055   RPOC_PEDAC DNA-directed RNA polymerase subuni...590.0000001     60.8     53     71
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
646Q1XDN6    629   RPOC1_PORYE DNA-directed RNA polymerase subun...5614e-41     166     26     44GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
647P51251    629   RPOC1_PORPU DNA-directed RNA polymerase subun...5614e-41     166     26     44GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
648Q0I7L8    634   RPOC1_SYNS3 DNA-directed RNA polymerase subun...4906e-41     166     27     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
649Q55346    634   RPOC1_SYNPW DNA-directed RNA polymerase subun...4906e-41     166     27     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
650Q8DL56    622   RPOC1_THEEB DNA-directed RNA polymerase subun...4957e-41     166     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
651A2C6S9    634   RPOC1_PROM3 DNA-directed RNA polymerase subun...4908e-41     166     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
652Q5SCX9    676   RPOC1_HUPLU DNA-directed RNA polymerase subun...3708e-41     166     33     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
653P22704    625   RPOC1_NOSS1 DNA-directed RNA polymerase subun...5608e-41     165     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
654Q2JQT5    627   RPOC1_SYNJA DNA-directed RNA polymerase subun...3279e-41     165     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
655B4U738    1563   RPOC_HYDS0 DNA-directed RNA polymerase subuni...400.002     46.6     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
656Q9RVW0    1546   RPOC_DEIRA DNA-directed RNA polymerase subuni...1041     38.1     23     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
657Q2ST47    1255   RPOC_MYCCT DNA-directed RNA polymerase subuni...1930.0000002     60.5     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
658Q1GK48    1410   RPOC_SILST DNA-directed RNA polymerase subuni...620.0003     49.7     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
659O67763    1574   RPOC_AQUAE DNA-directed RNA polymerase subuni...991.2     37.7     24     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
660O78484    623   RPOC1_GUITH DNA-directed RNA polymerase subun...3351e-40     165     33     49GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
661Q3M5C9    625   RPOC1_ANAVT DNA-directed RNA polymerase subun...5601e-40     165     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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