UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDL140C

Length:

1733

Number of sequences:

5887

Description:

YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
61	B1YGU3	1199	RPOC_EXIS2 DNA-directed RNA polymerase subuni...	43	0.045	42.4	44	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
62	A6LKB7	1649	RPOC_THEM4 DNA-directed RNA polymerase subuni...	59	0.005	45.4	39	56
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
63	A4XI31	1163	RPOC_CALS8 DNA-directed RNA polymerase subuni...	59	0.22	40	36	54
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
64	Q67JT4	1179	RPOC_SYMTH DNA-directed RNA polymerase subuni...	144	0.013	44.3	24	41
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
65	A8F4G1	1650	RPOC_THELT DNA-directed RNA polymerase subuni...	157	7.7	35	22	42
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
66	Q1GBM4	1221	RPOC_LACDA DNA-directed RNA polymerase subuni...	152	0.34	39.7	28	43
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
67	Q04C21	1221	RPOC_LACDB DNA-directed RNA polymerase subuni...	152	0.38	39.3	28	43
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
68	A6Q1M4	1507	RPOC_NITSB DNA-directed RNA polymerase subuni...	61	0.002	46.6	36	61
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
69	A3CKD4	1215	RPOC_STRSV DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
70	Q2RFP0	1164	RPOC_MOOTA DNA-directed RNA polymerase subuni...	173	0.043	42.4	23	39
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
71	P15349	349	RPOA1_HALMO DNA-directed RNA polymerase subun...	267	4e-60	217	39	63
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
72	C1CMQ7	1225	RPOC_STRZP DNA-directed RNA polymerase subuni...	43	0.37	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
73	B5E2F2	1225	RPOC_STRP4 DNA-directed RNA polymerase subuni...	43	0.37	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
74	A8YXJ9	1217	RPOC_LACH4 DNA-directed RNA polymerase subuni...	64	0.67	38.5	33	53
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
75	A4VSK3	1215	RPOC_STRSY DNA-directed RNA polymerase subuni...	169	0.098	41.2	24	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
76	A4VYU4	1215	RPOC_STRS2 DNA-directed RNA polymerase subuni...	169	0.098	41.2	24	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
77	Q74L94	1224	RPOC_LACJO DNA-directed RNA polymerase subuni...	64	0.83	38.1	33	53
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
78	Q8DNF1	1225	RPOC_STRR6 DNA-directed RNA polymerase subuni...	43	0.37	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
79	A8AZI2	1215	RPOC_STRGC DNA-directed RNA polymerase subuni...	81	0.096	41.2	33	49
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
80	C1CTL3	1225	RPOC_STRZT DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
81	C1CGP3	1225	RPOC_STRZJ DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
82	B2IM39	1225	RPOC_STRPS DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
83	Q97NQ8	1225	RPOC_STRPN DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
84	B1I8R3	1225	RPOC_STRPI DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
85	C1CA05	1225	RPOC_STRP7 DNA-directed RNA polymerase subuni...	43	0.38	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
86	B8ZNW6	1225	RPOC_STRPJ DNA-directed RNA polymerase subuni...	43	0.37	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
87	Q04IK7	1225	RPOC_STRP2 DNA-directed RNA polymerase subuni...	43	0.37	39.3	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
88	C0M7R5	1211	RPOC_STRE4 DNA-directed RNA polymerase subuni...	43	0.34	39.7	42	60
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
89	B0TC49	1180	RPOC_HELMI DNA-directed RNA polymerase subuni...	146	0.003	46.2	26	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
90	B6YT17	391	RPOA2_THEON DNA-directed RNA polymerase subun...	415	5e-59	215	33	52
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
91	B0KCJ3	1184	RPOC_THEP3 DNA-directed RNA polymerase subuni...	146	0.053	42.4	23	40
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.

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