Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541B7KN46    1405   RPOC_METC4 DNA-directed RNA polymerase subuni...1460.007     45.1     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
542C3K2Y2    1399   RPOC_PSEFS DNA-directed RNA polymerase subuni...1800.001     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
543Q5LMQ6    1413   RPOC_SILPO DNA-directed RNA polymerase subuni...1450.0001     51.2     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
544Q73IW9    2837   RPOBC_WOLPM Bifunctional DNA-directed RNA pol...1440.005     45.4     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
545Q661N0    1377   RPOC_BORGA DNA-directed RNA polymerase subuni...330.00007     51.6     64     82
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
546B0KK61    1399   RPOC_PSEPG DNA-directed RNA polymerase subuni...1800.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
547A5CW24    1393   RPOC_VESOH DNA-directed RNA polymerase subuni...1440.001     47.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
548A0M3Y8    1433   RPOC_GRAFK DNA-directed RNA polymerase subuni...1030.005     45.4     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
549A9ISG4    1403   RPOC_BART1 DNA-directed RNA polymerase subuni...1450.0009     48.1     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
550Q2GJ69    1409   RPOC_ANAPZ DNA-directed RNA polymerase subuni...390.21     40     46     69
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
551B1LY42    1403   RPOC_METRJ DNA-directed RNA polymerase subuni...1480.006     45.4     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
552Q1H4P3    1409   RPOC_METFK DNA-directed RNA polymerase subuni...1020.0004     49.3     31     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
553Q6AP77    1349   RPOC_DESPS DNA-directed RNA polymerase subuni...1440.021     43.5     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
554B9KBJ4    1690   RPOC_THENN DNA-directed RNA polymerase subuni...1104.3     35.8     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
555A7IKQ1    1394   RPOC_XANP2 DNA-directed RNA polymerase subuni...1480.009     44.7     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
556B1JJK0    1406   RPOC_YERPY DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
557Q66FQ1    1406   RPOC_YERPS DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
558A4TS28    1406   RPOC_YERPP DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
559Q1CN77    1406   RPOC_YERPN DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
560A9R0H9    1406   RPOC_YERPG DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
561Q8D1H3    1406   RPOC_YERPE DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
562B2K114    1406   RPOC_YERPB DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
563Q1C1U2    1406   RPOC_YERPA DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
564A7FNI2    1406   RPOC_YERP3 DNA-directed RNA polymerase subuni...1440.001     47.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
565Q1LSX6    1408   RPOC_BAUCH DNA-directed RNA polymerase subuni...400.001     47.4     50     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
566B2FQ39    1406   RPOC_STRMK DNA-directed RNA polymerase subuni...1440.0005     48.9     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
567Q1QN43    1399   RPOC_NITHX DNA-directed RNA polymerase subuni...1520.0002     50.4     28     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
568A5EX69    1402   RPOC_DICNV DNA-directed RNA polymerase subuni...1027     35     25     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
569Q5L404    1199   RPOC_GEOKA DNA-directed RNA polymerase subuni...430.066     42     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
570P41185    1413   RPOC_BUCAP DNA-directed RNA polymerase subuni...400.008     44.7     45     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
571Q6FZM0    1402   RPOC_BARQU DNA-directed RNA polymerase subuni...1450.0006     48.5     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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