Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511B9KHW2    1415   RPOC_ANAMF DNA-directed RNA polymerase subuni...1025.9     35.4     25     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
512Q3K5Y2    1399   RPOC_PSEPF DNA-directed RNA polymerase subuni...1800.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
513A1KB33    1404   RPOC_AZOSB DNA-directed RNA polymerase subuni...400.011     44.3     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
514B2VG97    1407   RPOC_ERWT9 DNA-directed RNA polymerase subuni...400.004     45.8     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
515Q6FF89    1397   RPOC_ACIAD DNA-directed RNA polymerase subuni...1800.0008     48.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
516A8HTZ1    1393   RPOC_AZOC5 DNA-directed RNA polymerase subuni...1450.003     46.6     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
517B3QYL5    1499   RPOC_CHLT3 DNA-directed RNA polymerase subuni...400.2     40.4     43     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
518B3CV54    1396   RPOC_ORITI DNA-directed RNA polymerase subuni...1820.0007     48.5     24     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
519Q9Z999    1393   RPOC_CHLPN DNA-directed RNA polymerase subuni...1440.75     38.5     23     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
520Q9X6Y2    1576   RPOC_AQUPY DNA-directed RNA polymerase subuni...991.3     37.7     23     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
521B6IRP7    1430   RPOC_RHOCS DNA-directed RNA polymerase subuni...1025.4     35.4     25     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
522Q8KTH8    1405   RPOC_XANOR DNA-directed RNA polymerase subuni...1440.0006     48.5     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
523B2SQQ2    1405   RPOC_XANOP DNA-directed RNA polymerase subuni...1440.0006     48.5     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
524Q2NZX9    1405   RPOC_XANOM DNA-directed RNA polymerase subuni...1440.0006     48.5     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
525P0CX07    397   RPOA2_HALSA DNA-directed RNA polymerase subun...4121e-45     176     31     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
526B0R8D3    397   RPOA2_HALS3 DNA-directed RNA polymerase subun...4121e-45     176     31     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
527Q4K527    1399   RPOC_PSEF5 DNA-directed RNA polymerase subuni...1800.001     47.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
528A6VKC4    1419   RPOC_ACTSZ DNA-directed RNA polymerase subuni...1440.004     46.2     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
529Q2RQV4    1393   RPOC_RHORT DNA-directed RNA polymerase subuni...350.00006     51.6     63     77
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
530P57145    1407   RPOC_BUCAI DNA-directed RNA polymerase subuni...400.008     45.1     45     70
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0016616; F:oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; IEA:InterPro.
531A6LE80    1431   RPOC_PARD8 DNA-directed RNA polymerase subuni...680.016     43.9     38     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
532Q2GD91    1375   RPOC_NEOSM DNA-directed RNA polymerase subuni...1460.00007     51.6     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
533B1JDX0    1399   RPOC_PSEPW DNA-directed RNA polymerase subuni...1800.001     47.8     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
534Q65W40    1420   RPOC_MANSM DNA-directed RNA polymerase subuni...1440.001     48.1     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
535Q1IFX2    1399   RPOC_PSEE4 DNA-directed RNA polymerase subuni...1800.003     46.2     23     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
536B1ZGS1    1405   RPOC_METPB DNA-directed RNA polymerase subuni...1460.005     45.4     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
537B8IS79    1400   RPOC_METNO DNA-directed RNA polymerase subuni...1460.005     45.8     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
538B1HMZ5    1227   RPOC_LYSSC DNA-directed RNA polymerase subuni...1910.0001     50.8     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
539Q1R0I1    1405   RPOC_CHRSD DNA-directed RNA polymerase subuni...400.019     43.5     45     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
540A9W8N9    1405   RPOC_METEP DNA-directed RNA polymerase subuni...1460.007     45.1     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
541B7KN46    1405   RPOC_METC4 DNA-directed RNA polymerase subuni...1460.007     45.1     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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