Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481Q0SNB9    1377   RPOC_BORAP DNA-directed RNA polymerase subuni...330.00007     51.6     64     82
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
482Q5L5I4    1393   RPOC_CHLAB DNA-directed RNA polymerase subuni...1470.2     40.4     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
483Q4UKD5    1372   RPOC_RICFE DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
484Q5FTX8    1439   RPOC_GLUOX DNA-directed RNA polymerase subuni...1810.001     47.8     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
485A6U852    1401   RPOC_SINMW DNA-directed RNA polymerase subuni...1450.002     46.6     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
486Q5HC04    1411   RPOC_EHRRW DNA-directed RNA polymerase subuni...1970.0004     48.9     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
487A9M5Q8    1400   RPOC_BRUC2 DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
488Q3SSX9    1399   RPOC_NITWN DNA-directed RNA polymerase subuni...1520.0007     48.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
489A5VR14    1400   RPOC_BRUO2 DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
490Q8YHP7    1400   RPOC_BRUME DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
491P77839    1053   RPOC_BROTH DNA-directed RNA polymerase subuni...760.000000001     67.4     47     64
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
492Q8G070    1400   RPOC_BRUSU DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
493C0RJK9    1400   RPOC_BRUMB DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
494B0CH40    1400   RPOC_BRUSI DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
495Q2LQ86    1381   RPOC_SYNAS DNA-directed RNA polymerase subuni...1440.002     46.6     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
496Q57CP9    1400   RPOC_BRUAB DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
497Q2YM16    1400   RPOC_BRUA2 DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
498B2S686    1400   RPOC_BRUA1 DNA-directed RNA polymerase subuni...1460.002     47     23     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
499Q492C0    1416   RPOC_BLOPB DNA-directed RNA polymerase subuni...400.013     44.3     45     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
500P15353    393   RPOA2_HALMO DNA-directed RNA polymerase subun...3925e-46     177     31     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
501A5IJW2    1690   RPOC_THEP1 DNA-directed RNA polymerase subuni...1101.5     37.4     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
502A1S212    1404   RPOC_SHEAM DNA-directed RNA polymerase subuni...400.008     45.1     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
503A5CC92    1396   RPOC_ORITB DNA-directed RNA polymerase subuni...1820.0006     48.5     24     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
504Q7VRP8    1420   RPOC_BLOFL DNA-directed RNA polymerase subuni...400.004     45.8     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
505Q48D30    1399   RPOC_PSE14 DNA-directed RNA polymerase subuni...1800.001     47.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
506Q889X7    1399   RPOC_PSESM DNA-directed RNA polymerase subuni...1800.001     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
507Q2NWR5    1406   RPOC_SODGM DNA-directed RNA polymerase subuni...1440.003     46.2     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
508A8F0P8    1374   RPOC_RICM5 DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
509Q4ZMN8    1399   RPOC_PSEU2 DNA-directed RNA polymerase subuni...1800.001     47.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
510Q5PBG3    1415   RPOC_ANAMM DNA-directed RNA polymerase subuni...1025.9     35.4     25     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
511B9KHW2    1415   RPOC_ANAMF DNA-directed RNA polymerase subuni...1025.9     35.4     25     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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