Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451B2V7L9    1579   RPOC_SULSY DNA-directed RNA polymerase subuni...980.33     39.7     24     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
452Q9ZE20    1372   RPOC_RICPR DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
453Q73JJ8    1424   RPOC_TREDE DNA-directed RNA polymerase subuni...2080.00005     52     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
454Q134R9    1400   RPOC_RHOPS DNA-directed RNA polymerase subuni...1550.0003     49.3     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
455A8AKT8    1407   RPOC_CITK8 DNA-directed RNA polymerase subuni...1440.003     46.2     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
456B3PW60    1402   RPOC_RHIE6 DNA-directed RNA polymerase subuni...1450.004     45.8     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
457Q3Z8V3    1295   RPOC_DEHE1 DNA-directed RNA polymerase subuni...1670.027     43.1     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
458A8GQW5    1372   RPOC_RICRS DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
459B0BWB0    1372   RPOC_RICRO DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
460Q5FFD8    1411   RPOC_EHRRG DNA-directed RNA polymerase subuni...1970.0004     49.3     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
461Q87KQ5    1400   RPOC_VIBPA DNA-directed RNA polymerase subuni...400.0005     48.9     53     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
462P47716    1286   RPOC_MYCGA DNA-directed RNA polymerase subuni...981.8     37     26     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
463Q211D9    1401   RPOC_RHOPB DNA-directed RNA polymerase subuni...1520.0006     48.5     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
464Q4JT33    1323   RPOC_CORJK DNA-directed RNA polymerase subuni...430.46     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
465Q7MGS0    1400   RPOC_VIBVY DNA-directed RNA polymerase subuni...1011.5     37.4     25     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
466Q8DD19    1400   RPOC_VIBVU DNA-directed RNA polymerase subuni...1011.5     37.4     25     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
467B4E5B3    1413   RPOC_BURCJ DNA-directed RNA polymerase subuni...1460.0008     48.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
468A4W5A8    1407   RPOC_ENT38 DNA-directed RNA polymerase subuni...1440.003     46.2     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
469A1VAJ5    1385   RPOC_DESVV DNA-directed RNA polymerase subuni...1120.32     39.7     24     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
470Q727C6    1385   RPOC_DESVH DNA-directed RNA polymerase subuni...1120.32     39.7     24     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
471A9H3S0    1398   RPOC_GLUDA DNA-directed RNA polymerase subuni...1450.0001     50.8     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
472Q1D7U2    1403   RPOC_MYXXD DNA-directed RNA polymerase subuni...390.006     45.4     49     74
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
473Q2K9M3    1402   RPOC_RHIEC DNA-directed RNA polymerase subuni...1450.004     45.8     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
474Q47UW0    1406   RPOC_COLP3 DNA-directed RNA polymerase subuni...400.01     44.7     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
475Q21SF8    1405   RPOC_RHOFD DNA-directed RNA polymerase subuni...1440.003     46.2     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
476Q5QWA4    1411   RPOC_IDILO DNA-directed RNA polymerase subuni...400.011     44.7     48     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
477Q92QH6    1401   RPOC_RHIME DNA-directed RNA polymerase subuni...1450.002     47.4     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
478Q6ACX6    1291   RPOC_LEIXX DNA-directed RNA polymerase subuni...1700.055     42     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
479Q11HB4    1399   RPOC_MESSB DNA-directed RNA polymerase subuni...1450.0005     48.9     28     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
480A0KQA4    1434   RPOC_AERHH DNA-directed RNA polymerase subuni...1520.0006     48.5     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
481Q0SNB9    1377   RPOC_BORAP DNA-directed RNA polymerase subuni...330.00007     51.6     64     82
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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