Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q9RH40    1372   RPOC_RICCN DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
422A1T4J3    1317   RPOC_MYCVP DNA-directed RNA polymerase subuni...430.13     40.8     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
423A9MHE9    1407   RPOC_SALAR DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
424Q7MX26    1433   RPOC_PORGI DNA-directed RNA polymerase subuni...750.061     42     35     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
425B0VLZ5    1397   RPOC_ACIBS DNA-directed RNA polymerase subuni...400.002     47     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
426Q8FB83    1407   RPOC_ECOL6 DNA-directed RNA polymerase subuni...1440.002     46.6     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
427Q1MIE8    1402   RPOC_RHIL3 DNA-directed RNA polymerase subuni...1450.004     46.2     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
428Q5YPE1    1317   RPOC_NOCFA DNA-directed RNA polymerase subuni...430.35     39.7     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
429A6UZI2    1399   RPOC_PSEA7 DNA-directed RNA polymerase subuni...1800.02     43.5     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
430Q0ANP4    1405   RPOC_MARMM DNA-directed RNA polymerase subuni...420.032     42.7     45     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
431P0A2R4    1407   RPOC_SALTY DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
432P0A2R5    1407   RPOC_SALTI DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
433Q57H68    1407   RPOC_SALCH DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
434Q9HWC9    1399   RPOC_PSEAE DNA-directed RNA polymerase subuni...1800.02     43.5     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
435Q02T86    1399   RPOC_PSEAB DNA-directed RNA polymerase subuni...1800.02     43.5     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
436Q5FM96    1217   RPOC_LACAC DNA-directed RNA polymerase subuni...640.27     40     34     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
437Q0SY12    1407   RPOC_SHIF8 DNA-directed RNA polymerase subuni...1440.002     46.6     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
438Q0BJ53    1413   RPOC_BURCM DNA-directed RNA polymerase subuni...1470.002     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
439B1YRC3    1413   RPOC_BURA4 DNA-directed RNA polymerase subuni...1470.002     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
440Q5PK92    1407   RPOC_SALPA DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
441A4JAN3    1413   RPOC_BURVG DNA-directed RNA polymerase subuni...1460.0007     48.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
442B2T758    1412   RPOC_BURPP DNA-directed RNA polymerase subuni...1830.001     47.8     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
443Q13TG3    1412   RPOC_BURXL DNA-directed RNA polymerase subuni...1830.002     47     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
444A4G9U4    1414   RPOC_HERAR DNA-directed RNA polymerase subuni...1830.001     47.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
445Q68XM7    1372   RPOC_RICTY DNA-directed RNA polymerase subuni...370.00002     53.9     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
446A8EXK9    1378   RPOC_RICCK DNA-directed RNA polymerase subuni...370.00002     53.9     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
447B0TX11    1416   RPOC_FRAP2 DNA-directed RNA polymerase subuni...590.003     46.6     39     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
448B0VDH9    1397   RPOC_ACIBY DNA-directed RNA polymerase subuni...400.002     47     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
449A3M1G4    1397   RPOC_ACIBT DNA-directed RNA polymerase subuni...400.002     47     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
450B2I1Z2    1397   RPOC_ACIBC DNA-directed RNA polymerase subuni...400.002     47     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
451B2V7L9    1579   RPOC_SULSY DNA-directed RNA polymerase subuni...980.33     39.7     24     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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