Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361C3PKN2    1331   RPOC_CORA7 DNA-directed RNA polymerase subuni...1440.13     40.8     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
362A5FZX0    1388   RPOC_ACICJ DNA-directed RNA polymerase subuni...1450.0003     49.7     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
363B2GIK0    1296   RPOC_KOCRD DNA-directed RNA polymerase subuni...1730.066     42     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
364Q39KH4    1414   RPOC_BURS3 DNA-directed RNA polymerase subuni...1470.002     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
365Q8CJT1    1299   RPOC_STRCO DNA-directed RNA polymerase subuni...1730.003     46.2     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
366B1VES2    1323   RPOC_CORU7 DNA-directed RNA polymerase subuni...430.55     38.9     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
367A8GMA8    1372   RPOC_RICAH DNA-directed RNA polymerase subuni...370.00002     53.5     59     78
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
368B2JIH3    1413   RPOC_BURP8 DNA-directed RNA polymerase subuni...1830.001     47.4     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
369B1Y7H2    1407   RPOC_LEPCP DNA-directed RNA polymerase subuni...1930.008     45.1     22     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
370A3MRU6    1412   RPOC_BURM7 DNA-directed RNA polymerase subuni...1830.001     47.8     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
371A1V8B1    1412   RPOC_BURMS DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
372Q62GJ7    1412   RPOC_BURMA DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
373A2S7G7    1412   RPOC_BURM9 DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
374Q63Q04    1412   RPOC_BURPS DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
375A3NEI6    1412   RPOC_BURP6 DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
376Q3JMQ4    1412   RPOC_BURP1 DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
377A3P0C4    1412   RPOC_BURP0 DNA-directed RNA polymerase subuni...1830.003     46.6     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
378B2IK56    1394   RPOC_BEII9 DNA-directed RNA polymerase subuni...1450.003     46.2     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
379A5FIJ4    1436   RPOC_FLAJ1 DNA-directed RNA polymerase subuni...400.007     45.1     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
380A9N0J5    1407   RPOC_SALPB DNA-directed RNA polymerase subuni...1440.001     47.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
381A9BR99    1409   RPOC_DELAS DNA-directed RNA polymerase subuni...1610.0005     48.9     29     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
382Q8G515    1345   RPOC_BIFLO DNA-directed RNA polymerase subuni...1760.000001     57.4     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
383B3DTE1    1345   RPOC_BIFLD DNA-directed RNA polymerase subuni...1760.000001     57.4     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
384Q255E5    1393   RPOC_CHLFF DNA-directed RNA polymerase subuni...1470.06     42     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
385B2HSJ4    1316   RPOC_MYCMM DNA-directed RNA polymerase subuni...430.22     40     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
386Q2IXR9    1400   RPOC_RHOP2 DNA-directed RNA polymerase subuni...1450.0004     48.9     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
387Q32AG0    1407   RPOC_SHIDS DNA-directed RNA polymerase subuni...1440.002     46.6     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
388P30761    1316   RPOC_MYCLE DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
389B8ZSC6    1316   RPOC_MYCLB DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
390C5CKF4    1409   RPOC_VARPS DNA-directed RNA polymerase subuni...1440.003     46.2     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
391P36252    1690   RPOC_THEMA DNA-directed RNA polymerase subuni...1101.5     37.4     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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