Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301B4S498    1499   RPOC_PROA2 DNA-directed RNA polymerase subuni...400.019     43.5     43     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
302Q89B21    1404   RPOC_BUCBP DNA-directed RNA polymerase subuni...1440.007     45.1     23     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
303Q1BDE9    1315   RPOC_MYCSS DNA-directed RNA polymerase subuni...430.12     41.2     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
304A1UBJ4    1315   RPOC_MYCSK DNA-directed RNA polymerase subuni...430.12     41.2     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
305A3PV79    1315   RPOC_MYCSJ DNA-directed RNA polymerase subuni...430.12     41.2     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
306B2KEN0    1385   RPOC_ELUMP DNA-directed RNA polymerase subuni...1002.4     37     25     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
307A4YSI2    1399   RPOC_BRASO DNA-directed RNA polymerase subuni...1550.0003     49.7     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
308A7MXF0    1400   RPOC_VIBHB DNA-directed RNA polymerase subuni...400.0005     48.9     53     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
309A0Q866    1417   RPOC_FRATN DNA-directed RNA polymerase subuni...590.0008     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
310A6GYT9    1438   RPOC_FLAPJ DNA-directed RNA polymerase subuni...760.061     42     32     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
311Q01VB2    1403   RPOC_SOLUE DNA-directed RNA polymerase subuni...400.005     45.4     48     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
312C1AL01    1316   RPOC_MYCBT DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
313A1KGE8    1316   RPOC_MYCBP DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
314A2SLG4    1412   RPOC_METPP DNA-directed RNA polymerase subuni...1460.002     46.6     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
315A0QS66    1317   RPOC_MYCS2 DNA-directed RNA polymerase subuni...430.19     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
316B4SG10    1497   RPOC_PELPB DNA-directed RNA polymerase subuni...1730.029     43.1     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
317B0BBU5    1396   RPOC_CHLTB DNA-directed RNA polymerase subuni...430.27     39.7     47     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
318P0A674    1316   RPOC_MYCTU DNA-directed RNA polymerase subuni...430.2     40.4     42     60GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0040007; P:growth; IMP:MTBBASE.
319A5U053    1316   RPOC_MYCTA DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
320P0A675    1316   RPOC_MYCBO DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
321B3EL62    1498   RPOC_CHLPB DNA-directed RNA polymerase subuni...400.016     43.9     43     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
322B0SSI3    1433   RPOC_LEPBP DNA-directed RNA polymerase subuni...1880.006     45.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
323B0SAG0    1433   RPOC_LEPBA DNA-directed RNA polymerase subuni...1880.006     45.4     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
324Q3B1H8    1498   RPOC_PELLD DNA-directed RNA polymerase subuni...400.037     42.7     43     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
325B0B7N0    1396   RPOC_CHLT2 DNA-directed RNA polymerase subuni...430.27     39.7     47     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
326Q2S906    1396   RPOC_HAHCH DNA-directed RNA polymerase subuni...410.01     44.7     44     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
327Q0ABI1    1426   RPOC_ALHEH DNA-directed RNA polymerase subuni...2480.00007     51.6     25     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
328A8Z5T2    1464   RPOC_SULMW DNA-directed RNA polymerase subuni...920.007     45.1     33     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
329Q8TRB8    397   RPOA2_METAC DNA-directed RNA polymerase subun...3911e-48     185     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
330A0QL48    1316   RPOC_MYCA1 DNA-directed RNA polymerase subuni...430.2     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
331B1MH61    1319   RPOC_MYCA9 DNA-directed RNA polymerase subuni...430.19     40.4     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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