Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271B3R7T5    1414   RPOC_CUPTR DNA-directed RNA polymerase subuni...400.003     46.6     50     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
272B3E164    1390   RPOC_METI4 DNA-directed RNA polymerase subuni...1440.054     42.4     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
273A5USR6    1504   RPOC_ROSS1 DNA-directed RNA polymerase subuni...430.007     45.1     44     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
274A4SGK5    1484   RPOC_PROVI DNA-directed RNA polymerase subuni...400.037     42.7     43     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
275Q5NPK4    1391   RPOC_ZYMMO DNA-directed RNA polymerase subuni...330.0001     50.8     67     79
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
276Q2GCD8    1427   RPOC_NOVAD DNA-directed RNA polymerase subuni...1470.0004     49.3     28     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
277B2SFD7    1417   RPOC_FRATM DNA-directed RNA polymerase subuni...590.0008     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
278Q11QA6    1438   RPOC_CYTH3 DNA-directed RNA polymerase subuni...400.026     43.1     45     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
279Q8XUZ9    1409   RPOC_RALSO DNA-directed RNA polymerase subuni...400.001     47.8     50     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
280Q0BKC6    1417   RPOC_FRATO DNA-directed RNA polymerase subuni...590.001     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
281Q2A1M8    1417   RPOC_FRATH DNA-directed RNA polymerase subuni...590.001     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
282A4IWA0    1417   RPOC_FRATW DNA-directed RNA polymerase subuni...590.0008     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
283Q5NID1    1417   RPOC_FRATT DNA-directed RNA polymerase subuni...590.0008     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
284Q14JT4    1417   RPOC_FRAT1 DNA-directed RNA polymerase subuni...590.0008     48.1     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
285B3EER3    1496   RPOC_CHLL2 DNA-directed RNA polymerase subuni...400.018     43.9     43     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
286Q82DQ4    1299   RPOC_STRAW DNA-directed RNA polymerase subuni...1730.005     45.4     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
287A4WVL5    1415   RPOC_RHOS5 DNA-directed RNA polymerase subuni...1450.005     45.4     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
288Q8PUR2    408   RPOA2_METMA DNA-directed RNA polymerase subun...4091e-49     188     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
289B9M6V1    1377   RPOC_GEOSF DNA-directed RNA polymerase subuni...1740.005     45.8     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
290A5CUC6    1299   RPOC_CLAM3 DNA-directed RNA polymerase subuni...1780.15     40.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
291B0RB26    1299   RPOC_CLAMS DNA-directed RNA polymerase subuni...1780.15     40.8     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
292A1A316    1337   RPOC_BIFAA DNA-directed RNA polymerase subuni...1800.0001     50.8     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
293Q8FS96    1333   RPOC_COREF DNA-directed RNA polymerase subuni...1440.19     40.4     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
294Q160X8    1414   RPOC_ROSDO DNA-directed RNA polymerase subuni...1450.0002     50.4     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
295B9MH46    1409   RPOC_ACIET DNA-directed RNA polymerase subuni...1440.001     47.4     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
296Q3ATP4    1502   RPOC_CHLCH DNA-directed RNA polymerase subuni...400.09     41.6     43     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
297A5ELN6    1399   RPOC_BRASB DNA-directed RNA polymerase subuni...1550.0002     50.1     28     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
298Q8D232    1405   RPOC_WIGBR DNA-directed RNA polymerase subuni...1420.0001     50.4     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
299A1WCM8    1409   RPOC_ACISJ DNA-directed RNA polymerase subuni...1440.002     47.4     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
300A9NEL8    1375   RPOC_ACHLI DNA-directed RNA polymerase subuni...790.035     42.7     38     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
301B4S498    1499   RPOC_PROA2 DNA-directed RNA polymerase subuni...400.019     43.5     43     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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