Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q1GT24    1427   RPOC_SPHAL DNA-directed RNA polymerase subuni...410.00009     51.2     59     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
242Q0SFB4    1318   RPOC_RHOSR DNA-directed RNA polymerase subuni...430.37     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
243C5C0K2    1296   RPOC_BEUC1 DNA-directed RNA polymerase subuni...1730.008     45.1     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
244A5VBZ7    1423   RPOC_SPHWW DNA-directed RNA polymerase subuni...330.0001     51.2     67     79
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
245Q123G4    1408   RPOC_POLSJ DNA-directed RNA polymerase subuni...1460.008     45.1     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
246B1I1M9    1154   RPOC_DESAP DNA-directed RNA polymerase subuni...400.069     41.6     45     65
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
247Q820D6    1286   RPOC_TROWT DNA-directed RNA polymerase subuni...430.67     38.5     44     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
248Q6F0L8    1254   RPOC_MESFL DNA-directed RNA polymerase subuni...1025.2     35.8     24     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
249Q820D9    1286   RPOC_TROW8 DNA-directed RNA polymerase subuni...430.67     38.5     44     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
250A1WVC8    1430   RPOC_HALHL DNA-directed RNA polymerase subuni...850.003     46.2     36     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
251Q6N4S0    1402   RPOC_RHOPA DNA-directed RNA polymerase subuni...1520.0002     50.4     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
252A6TWI9    1171   RPOC_ALKMQ DNA-directed RNA polymerase subuni...1460.023     43.5     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
253A1T064    1406   RPOC_PSYIN DNA-directed RNA polymerase subuni...1440.012     44.3     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
254Q0K607    1415   RPOC_CUPNH DNA-directed RNA polymerase subuni...400.003     46.6     50     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
255A0RQI4    1508   RPOC_CAMFF DNA-directed RNA polymerase subuni...2110.00004     52.4     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
256C0ZVQ7    1318   RPOC_RHOE4 DNA-directed RNA polymerase subuni...430.36     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
257P11514    393   RPOA2_SULAC DNA-directed RNA polymerase subun...4101e-50     191     32     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
258A1TVS9    1411   RPOC_ACIAC DNA-directed RNA polymerase subuni...1440.007     45.1     26     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
259Q1IHH5    1403   RPOC_KORVE DNA-directed RNA polymerase subuni...400.01     44.7     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
260A5GAY2    1377   RPOC_GEOUR DNA-directed RNA polymerase subuni...1770.005     45.4     25     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
261A1WK56    1411   RPOC_VEREI DNA-directed RNA polymerase subuni...1610.001     47.8     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
262C6E4R3    1382   RPOC_GEOSM DNA-directed RNA polymerase subuni...1440.006     45.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
263P09847    449   RPOA2_METTW DNA-directed RNA polymerase subun...4162e-50     191     31     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
264Q1LI21    1413   RPOC_RALME DNA-directed RNA polymerase subuni...400.003     46.6     50     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
265Q46WD5    1415   RPOC_CUPPJ DNA-directed RNA polymerase subuni...400.003     46.6     50     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
266B6JES1    1399   RPOC_OLICO DNA-directed RNA polymerase subuni...330.0001     51.2     67     79
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
267Q8NT25    1333   RPOC_CORGL DNA-directed RNA polymerase subuni...1440.1     41.2     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
268Q6MJ10    1375   RPOC_BDEBA DNA-directed RNA polymerase subuni...1440.001     47.8     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
269A4QBG3    1333   RPOC_CORGB DNA-directed RNA polymerase subuni...1440.1     41.2     24     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
270Q6NJF6    1336   RPOC_CORDI DNA-directed RNA polymerase subuni...1440.18     40.4     22     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
271B3R7T5    1414   RPOC_CUPTR DNA-directed RNA polymerase subuni...400.003     46.6     50     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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