Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q8EWX0    1288   RPOC_MYCPE DNA-directed RNA polymerase subuni...490.027     43.1     43     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
212P0C0D9    989   RPOC_STRPY DNA-directed RNA polymerase subuni...560.00000006     61.6     57     71
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
213B2TIG9    1177   RPOC_CLOBB DNA-directed RNA polymerase subuni...1460.0007     48.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
214A5N4P0    1174   RPOC_CLOK5 DNA-directed RNA polymerase subuni...1460.023     43.5     23     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
215A6LPQ5    1178   RPOC_CLOB8 DNA-directed RNA polymerase subuni...1750.0005     48.9     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
216B9KFG8    1517   RPOC_CAMLR DNA-directed RNA polymerase subuni...1460.0004     49.3     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
217A9KJL3    1255   RPOC_CLOPH DNA-directed RNA polymerase subuni...1440.012     44.3     23     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
218Q3ILP8    1390   RPOC_PSEHT DNA-directed RNA polymerase subuni...400.014     43.9     45     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
219C3N7Q1    392   RPOA2_SULIY DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
220C3NFS2    392   RPOA2_SULIN DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
221C3MYA0    392   RPOA2_SULIM DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
222C3MRK4    392   RPOA2_SULIL DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
223C4KIV9    392   RPOA2_SULIK DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
224C3MZM9    392   RPOA2_SULIA DNA-directed RNA polymerase subun...4132e-52     196     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
225B8DWJ5    1345   RPOC_BIFA0 DNA-directed RNA polymerase subuni...1590.0005     48.9     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
226A9KD37    1414   RPOC_COXBN DNA-directed RNA polymerase subuni...1930.0003     49.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
227B2UYA4    1177   RPOC_CLOBA DNA-directed RNA polymerase subuni...1440.0005     48.5     28     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
228P58192    392   RPOA2_SULSO DNA-directed RNA polymerase subun...4133e-52     195     30     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
229B1GZ76    1593   RPOC_UNCTG DNA-directed RNA polymerase subuni...1830.0006     48.5     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
230Q83ET0    1414   RPOC_COXBU DNA-directed RNA polymerase subuni...1930.0003     49.3     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
231A9NAL6    1414   RPOC_COXBR DNA-directed RNA polymerase subuni...1930.0003     49.3     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
232C1AYV8    1318   RPOC_RHOOB DNA-directed RNA polymerase subuni...430.38     39.3     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
233B5EFP4    1382   RPOC_GEOBB DNA-directed RNA polymerase subuni...1440.007     45.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
234P95405    1004   RPOC_OENOE DNA-directed RNA polymerase subuni...570.00000003     62.8     56     74
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
235O27126    451   RPOA2_METTH DNA-directed RNA polymerase subun...4177e-52     196     31     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
236Q9LQ02    1453   NRPD1_ARATH DNA-directed RNA polymerase D sub...1034.1     36.2     22     44GO:0000418; C:DNA-directed RNA polymerase IV complex; IDA:UniProtKB.
GO:0005507; F:copper ion binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0048038; F:quinone binding; IEA:InterPro.
GO:0009308; P:amine metabolic process; IEA:InterPro.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0010495; P:long-distance posttranscriptional gene silencing; IMP:TAIR.::GO:0006346; P:methylation-dependent chromatin silencing; IMP:TAIR.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:TAIR.
237Q976A6    392   RPOA2_SULTO DNA-directed RNA polymerase subun...4092e-51     193     32     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
238Q6A6K7    1293   RPOC_PROAC DNA-directed RNA polymerase subuni...1440.011     44.3     24     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
239A1SEK2    1290   RPOC_NOCSJ DNA-directed RNA polymerase subuni...1730.0004     48.9     24     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
240B3QBZ9    1400   RPOC_RHOPT DNA-directed RNA polymerase subuni...1520.0002     50.4     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
241Q1GT24    1427   RPOC_SPHAL DNA-directed RNA polymerase subuni...410.00009     51.2     59     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 211 - 240
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::