Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181B0S2E5    1202   RPOC_FINM2 DNA-directed RNA polymerase subuni...1840.01     44.7     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
182Q97EH0    1182   RPOC_CLOAB DNA-directed RNA polymerase subuni...1460.4     39.3     23     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
183Q5HVY8    1517   RPOC_CAMJR DNA-directed RNA polymerase subuni...1460.0004     49.3     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
184Q9PI30    1517   RPOC_CAMJE DNA-directed RNA polymerase subuni...1460.0004     49.3     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
185Q04E86    1233   RPOC_OENOB DNA-directed RNA polymerase subuni...430.84     38.1     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
186B5YFV7    1371   RPOC_THEYD DNA-directed RNA polymerase subuni...1030.002     47     31     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
187Q18CF3    1161   RPOC_CLOD6 DNA-directed RNA polymerase subuni...1540.001     47.8     29     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
188Q0BYA8    1402   RPOC_HYPNA DNA-directed RNA polymerase subuni...1480.008     45.1     28     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
189B1KSN2    1178   RPOC_CLOBM DNA-directed RNA polymerase subuni...1440.009     44.7     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
190Q2N5Q5    1438   RPOC_ERYLH DNA-directed RNA polymerase subuni...1440.0002     50.4     29     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
191Q8RHI7    1319   RPOC_FUSNN DNA-directed RNA polymerase subuni...480.038     42.7     44     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
192A8EVZ3    1511   RPOC_ARCB4 DNA-directed RNA polymerase subuni...1460.006     45.4     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
193A5I7L3    1178   RPOC_CLOBH DNA-directed RNA polymerase subuni...1440.007     45.1     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
194A7FZ76    1178   RPOC_CLOB1 DNA-directed RNA polymerase subuni...1440.007     45.1     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
195Q9AAU1    1396   RPOC_CAUCR DNA-directed RNA polymerase subuni...1460.002     46.6     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
196A0PXT9    1185   RPOC_CLONN DNA-directed RNA polymerase subuni...1460.27     39.7     25     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
197Q0SQD7    1178   RPOC_CLOPS DNA-directed RNA polymerase subuni...1460.002     47     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
198P0C2E8    1178   RPOC_CLOPE DNA-directed RNA polymerase subuni...1460.002     47     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
199Q0TMN9    1178   RPOC_CLOP1 DNA-directed RNA polymerase subuni...1460.002     47     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
200A7GJ81    1178   RPOC_CLOBL DNA-directed RNA polymerase subuni...1440.009     44.7     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
201C5CC70    1298   RPOC_MICLC DNA-directed RNA polymerase subuni...1450.017     43.9     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
202Q7VJ82    2894   RPOBC_HELHP Bifunctional DNA-directed RNA pol...890.003     46.2     31     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
203Q6MDM0    1388   RPOC_PARUW DNA-directed RNA polymerase subuni...430.76     38.5     44     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
204Q890N5    1135   RPOC_CLOTE DNA-directed RNA polymerase subuni...520.000000007     64.7     52     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
205Q058E6    1410   RPOC_BUCCC DNA-directed RNA polymerase subuni...400.005     45.8     48     68
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
206B1IGG1    1178   RPOC_CLOBK DNA-directed RNA polymerase subuni...1440.008     45.1     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
207A1VTF7    1404   RPOC_POLNA DNA-directed RNA polymerase subuni...570.008     44.7     42     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
208B0SUP8    1394   RPOC_CAUSK DNA-directed RNA polymerase subuni...1480.003     46.2     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
209B1MVW7    1220   RPOC_LEUCK DNA-directed RNA polymerase subuni...430.67     38.5     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
210Q7NQE7    1396   RPOC_CHRVO DNA-directed RNA polymerase subuni...1770.001     47.4     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
211Q8EWX0    1288   RPOC_MYCPE DNA-directed RNA polymerase subuni...490.027     43.1     43     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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