Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL140C
Length:
1733
Number of sequences:
5887
Description:
YDL140C RPO21 SGDID:S000002299, Chr IV from 210561-205360, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II largest subunit B220, part of central core; phosphorylation of C-terminal heptapeptide repeat domain regulates association with transcription and splicing factors; similar to bacterial beta-prime"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151A3DIZ5    1165   RPOC_CLOTH DNA-directed RNA polymerase subuni...1460.0002     50.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
152Q5M2F6    1212   RPOC_STRT2 DNA-directed RNA polymerase subuni...1690.28     39.7     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
153Q5LXV4    1212   RPOC_STRT1 DNA-directed RNA polymerase subuni...1690.28     39.7     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
154A9A9U9    386   RPOA2_METM6 DNA-directed RNA polymerase subun...4262e-56     207     32     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
155Q5JE34    391   RPOA2_PYRKO DNA-directed RNA polymerase subun...4072e-56     207     33     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
156A6Q6I3    1509   RPOC_SULNB DNA-directed RNA polymerase subuni...580.082     41.6     33     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
157B2UQY1    1398   RPOC_AKKM8 DNA-directed RNA polymerase subuni...1930.003     46.2     25     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
158Q03IK3    1212   RPOC_STRTD DNA-directed RNA polymerase subuni...1690.28     39.7     24     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
159A6VGV0    386   RPOA2_METM7 DNA-directed RNA polymerase subun...4275e-56     206     32     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
160A6W5T1    1293   RPOC_KINRD DNA-directed RNA polymerase subuni...430.82     38.1     42     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
161Q034X1    1220   RPOC_LACC3 DNA-directed RNA polymerase subuni...1750.23     40     25     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
162Q1CS68    2890   RPOBC_HELPH Bifunctional DNA-directed RNA pol...570.014     44.3     37     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
163Q1WVA4    1221   RPOC_LACS1 DNA-directed RNA polymerase subuni...1750.12     40.8     24     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
164A4IJI2    1199   RPOC_GEOTN DNA-directed RNA polymerase subuni...430.066     42     42     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
165B2A4D2    1218   RPOC_NATTJ DNA-directed RNA polymerase subuni...1200.005     45.4     29     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
166B3WAM7    1220   RPOC_LACCB DNA-directed RNA polymerase subuni...1750.22     40     25     38
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
167B2UUV9    2890   RPOBC_HELPS Bifunctional DNA-directed RNA pol...570.014     44.3     37     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
168Q30TP6    1503   RPOC_SULDN DNA-directed RNA polymerase subuni...730.0008     48.1     36     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
169Q03EB0    1212   RPOC_PEDPA DNA-directed RNA polymerase subuni...460.32     39.7     41     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
170O25806    2890   RPOBC_HELPY Bifunctional DNA-directed RNA pol...570.015     44.3     37     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
171A4FWF5    386   RPOA2_METM5 DNA-directed RNA polymerase subun...4265e-55     203     31     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
172Q17VN6    2890   RPOBC_HELAH Bifunctional DNA-directed RNA pol...570.015     43.9     37     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
173Q82Z41    1217   RPOC_ENTFA DNA-directed RNA polymerase subuni...430.6     38.9     42     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
174A8F977    1199   RPOC_BACP2 DNA-directed RNA polymerase subuni...1750.002     47     25     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
175Q9ZK23    2890   RPOBC_HELPJ Bifunctional DNA-directed RNA pol...570.015     44.3     37     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
176A1VYJ5    1517   RPOC_CAMJJ DNA-directed RNA polymerase subuni...1460.0004     49.3     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
177B7ICR2    1649   RPOC_THEAB DNA-directed RNA polymerase subuni...590.041     42.7     39     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
178A8FKR4    1517   RPOC_CAMJ8 DNA-directed RNA polymerase subuni...1460.0004     49.3     25     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
179Q6LXI7    386   RPOA2_METMP DNA-directed RNA polymerase subun...4263e-54     201     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
180A4YCR0    392   RPOA2_METS5 DNA-directed RNA polymerase subun...4094e-54     201     33     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
181B0S2E5    1202   RPOC_FINM2 DNA-directed RNA polymerase subuni...1840.01     44.7     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 151 - 180
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::