Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL126C
Length:
835
Number of sequences:
5887
Description:
YDL126C CDC48 SGDID:S000002284, Chr IV from 238664-236157, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase involved in ubiquitin-mediated protein degradation; Cdc48p-Npl4p-Ufd1p complex participates in ER-associated degradation (ERAD) while Cdc48p-Npl4p-Vms1p complex participates in mitochondria-associated degradation (MAD); along with Npl4-Ufd1 complex, important for maintaining the cell wall integrity during heat stress to allow G1 progression"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25694    835   CDC48_YEAST Cell division control protein 48 ...8350     1703     100     100GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; IDA:SGD.::GO:0005829; C:cytosol; IDA:SGD.::GO:0000837; C:Doa10p ubiquitin ligase complex; IDA:SGD.::GO:0043332; C:mating projection tip; IDA:SGD.::GO:0005792; C:microsome; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0071629; P:cytoplasm-associated proteasomal ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0016236; P:macroautophagy; IMP:SGD.::GO:0072671; P:mitochondria-associated protein catabolic process; IMP:SGD.::GO:0034727; P:piecemeal microautophagy of nucleus; IMP:SGD.::GO:0015031; P:protein transport; IDA:SGD.::GO:0031134; P:sister chromatid biorientation; IMP:SGD.::GO:0006906; P:vesicle fusion; IDA:SGD.
2Q9P3A7    815   CDC48_SCHPO Cell division cycle protein 48 OS...8210     1258     76     86GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0033554; P:cellular response to stress; IGI:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0061166; P:establishment of endoplasmic reticulum localization involved in endoplasmic reticulum polarization at cell division site; IMP:PomBase.::GO:0033047; P:regulation of mitotic sister chromatid segregation; IGI:PomBase.::GO:0030970; P:retrograde protein transport, ER to cytosol; ISS:PomBase.::GO:0051230; P:spindle disassembly; TAS:PomBase.::GO:0006906; P:vesicle fusion; ISS:PomBase.
3Q5AWS6    823   CDC48_EMENI Cell division control protein 48 ...8430     1258     74     85
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
4Q7KN62    801   TERA_DROME Transitional endoplasmic reticulum...8240     1155     67     82GO:0045169; C:fusome; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; NAS:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006200; P:ATP catabolic process; IGI:FlyBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016320; P:endoplasmic reticulum membrane fusion; ISS:FlyBase.::GO:0007029; P:endoplasmic reticulum organization; IMP:FlyBase.::GO:0030433; P:ER-associated protein catabolic process; IMP:FlyBase.::GO:0007030; P:Golgi organization; IMP:FlyBase.::GO:0000226; P:microtubule cytoskeleton organization; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007317; P:regulation of pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0006810; P:transport; IEA:UniProtKB-KW.
5P23787    805   TERA_XENLA Transitional endoplasmic reticulum...8240     1148     68     84GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IPI:UniProtKB.
GO:0034214; P:protein hexamerization; IDA:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
6P54774    807   CDC48_SOYBN Cell division cycle protein 48 ho...8220     1145     67     82GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
7Q7ZU99    806   TERA_DANRE Transitional endoplasmic reticulum...7860     1145     70     86GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
8Q9LZF6    810   CD48E_ARATH Cell division control protein 48 ...7830     1144     68     85GO:0005618; C:cell wall; IDA:TAIR.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-KW.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:TAIR.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q6GL04    805   TERA_XENTR Transitional endoplasmic reticulum...7860     1143     70     86GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; ISS:UniProtKB.
GO:0034214; P:protein hexamerization; ISS:UniProtKB.::GO:0006810; P:transport; IEA:UniProtKB-KW.
10Q96372    805   CDC48_CAPAN Cell division cycle protein 48 ho...8130     1142     67     83
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
11Q9SCN8    815   CD48D_ARATH Cell division control protein 48 ...8160     1141     67     83GO:0005856; C:cytoskeleton; IEA:UniProtKB-KW.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.
12P46462    806   TERA_RAT Transitional endoplasmic reticulum A...7860     1137     70     86GO:0005829; C:cytosol; IDA:RGD.::GO:0005783; C:endoplasmic reticulum; IDA:RGD.::GO:0005792; C:microsome; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IDA:BHF-UCL.::GO:0016887; F:ATPase activity; IDA:RGD.::GO:0042802; F:identical protein binding; IDA:BHF-UCL.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0005102; F:receptor binding; IDA:RGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.
13Q01853    806   TERA_MOUSE Transitional endoplasmic reticulum...7860     1137     70     86GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; ISS:UniProtKB.::GO:0005792; C:microsome; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0031593; F:polyubiquitin binding; IDA:BHF-UCL.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; IDA:MGI.::GO:0070842; P:aggresome assembly; IGI:MGI.::GO:0030970; P:retrograde protein transport, ER to cytosol; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IGI:MGI.
14P55072    806   TERA_HUMAN Transitional endoplasmic reticulum...7860     1137     70     86GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.::GO:0005792; C:microsome; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000502; C:proteasome complex; IDA:BHF-UCL.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; TAS:UniProtKB.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0031593; F:polyubiquitin binding; IDA:BHF-UCL.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0019903; F:protein phosphatase binding; IPI:BHF-UCL.
GO:0006919; P:activation of cysteine-type endopeptidase activity involved in apoptotic process; ISS:UniProtKB.::GO:0006302; P:double-strand break repair; IDA:UniProtKB.::GO:0030968; P:endoplasmic reticulum unfolded protein response; TAS:UniProtKB.::GO:0030433; P:ER-associated protein catabolic process; TAS:UniProtKB.::GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:BHF-UCL.::GO:0031334; P:positive regulation of protein complex assembly; IDA:BHF-UCL.::GO:0016567; P:protein ubiquitination; NAS:UniProtKB.::GO:0042981; P:regulation of apoptotic process; TAS:UniProtKB.::GO:0030970; P:retrograde protein transport, ER to cytosol; IDA:UniProtKB.
15Q3ZBT1    806   TERA_BOVIN Transitional endoplasmic reticulum...7860     1135     70     86GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
16P03974    806   TERA_PIG Transitional endoplasmic reticulum A...7860     1134     70     86GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
17P54811    809   TERA1_CAEEL Transitional endoplasmic reticulu...8200     1126     68     82GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; IPI:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:WormBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:WormBase.::GO:0071712; P:ER-associated misfolded protein catabolic process; IGI:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007126; P:meiosis; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.
18P54609    809   CD48A_ARATH Cell division control protein 48 ...7960     1115     68     84GO:0005618; C:cell wall; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005635; C:nuclear envelope; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009524; C:phragmoplast; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.::GO:0005819; C:spindle; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IMP:TAIR.::GO:0009846; P:pollen germination; IMP:TAIR.::GO:0009860; P:pollen tube growth; IMP:TAIR.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.
19P54812    810   TERA2_CAEEL Transitional endoplasmic reticulu...7860     1113     68     84GO:0034098; C:Cdc48p-Npl4p-Ufd1p AAA ATPase complex; IPI:WormBase.::GO:0005634; C:nucleus; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:WormBase.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:WormBase.::GO:0071712; P:ER-associated misfolded protein catabolic process; IGI:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0007126; P:meiosis; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.
20Q8SSJ5    780   CDC48_ENCCU Cell division control protein 48 ...7860     923     58     76GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
21Q58556    903   Y1156_METJA Cell division cycle protein 48 ho...6660     674     53     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
22O28972    733   Y1297_ARCFU Cell division cycle protein 48 ho...7520     651     47     66
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
23Q07590    780   SAV_SULAC Protein SAV OS=NBRC 15157 / NCIMB 1...7400     644     46     66
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
24O05209    745   VAT_THEAC VCP-like ATPase OS=NBRC 15155 / AMR...7100     631     48     66
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
25Q9HPF0    742   CDCH_HALSA Protein CdcH OS=(Halobacterium hal...7590     611     44     62
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
26Q3UMC0    893   SPAT5_MOUSE Spermatogenesis-associated protei...5843e-169     520     44     65GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
27Q8NB90    893   SPAT5_HUMAN Spermatogenesis-associated protei...5842e-168     518     44     65GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
28O60058    809   AFG2_SCHPO ATPase family gene 2 protein OS=Sc...5142e-164     504     50     68GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:PomBase.
29P32794    780   AFG2_YEAST ATPase family gene 2 protein OS=Sa...2812e-56     211     39     58GO:0030687; C:preribosome, large subunit precursor; IMP:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.
GO:0042493; P:response to drug; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.
30O15381    856   NVL_HUMAN Nuclear valosin-containing protein-...6298e-148     463     41     59GO:0016235; C:aggresome; IDA:HPA.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
31O14325    779   YB7A_SCHPO Uncharacterized AAA domain-contain...2996e-57     213     38     61GO:0005730; C:nucleolus; ISS:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.
GO:0000055; P:ribosomal large subunit export from nucleus; ISS:PomBase.
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