Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL115C
Length:
353
Number of sequences:
5887
Description:
YDL115C IWR1 SGDID:S000002273, Chr IV from 254974-253995,255126-255045, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II transport factor, conserved from yeast to humans; involved in both basal and regulated transcription from RNA polymerase II (RNAP II) promoters, but not itself a transcription factor; interacts with most of the RNAP II subunits; nucleo-cytoplasmic shuttling protein; deletion causes hypersensitivity to K1 killer toxin"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07532    353   IWR1_YEAST RNA polymerase II nuclear localiza...3530     710     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0034629; P:cellular protein complex localization; IMP:SGD.::GO:0006913; P:nucleocytoplasmic transport; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
2O13951    277   IWR1_SCHPO RNA polymerase II nuclear localiza...2670.029     39.3     27     41GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:PomBase.
GO:0034629; P:cellular protein complex localization; ISS:PomBase.::GO:0006606; P:protein import into nucleus; ISS:PomBase.
3P0C6U4    4441   R1A_CVHN2 Replicase polyprotein 1a OS=Human c...1470.92     35.4     23     42GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IEA:InterPro.::GO:0019034; C:viral replication complex; IEA:InterPro.
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
4P0C6X3    7152   R1AB_CVHN2 Replicase polyprotein 1ab OS=Human...1470.93     35.4     23     42GO:0044172; C:host cell endoplasmic reticulum-Golgi intermediate compartment; IEA:UniProtKB-SubCell.::GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IEA:InterPro.::GO:0019034; C:viral replication complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0016896; F:exoribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008168; F:methyltransferase activity; IEA:InterPro.::GO:0008242; F:omega peptidase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
5Q12S90    275   DAPF_SHEDO Diaminopimelate epimerase OS=Shewa...1291     34.7     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008837; F:diaminopimelate epimerase activity; IEA:EC.
GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:InterPro.
6Q03603    795   DGK3_CAEEL Probable diacylglycerol kinase 3 O...691.4     34.7     33     57
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0004143; F:diacylglycerol kinase activity; IEA:EC.
GO:0007205; P:activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; IEA:InterPro.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0048169; P:regulation of long-term neuronal synaptic plasticity; IMP:WormBase.::GO:0043052; P:thermotaxis; IMP:WormBase.
7Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...1372.2     34.3     26     45GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
8Q8GYJ3    289   KRP4_ARATH Cyclin-dependent kinase inhibitor ...792.5     33.5     28     44GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0004861; F:cyclin-dependent protein kinase inhibitor activity; TAS:TAIR.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007050; P:cell cycle arrest; IEA:InterPro.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IDA:TAIR.
9Q20334    250   TNNI1_CAEEL Troponin I 1 OS=Caenorhabditis el...993.5     32.7     27     49GO:0005862; C:muscle thin filament tropomyosin; IDA:WormBase.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0030172; F:troponin C binding; IPI:WormBase.
GO:0007409; P:axonogenesis; IMP:WormBase.::GO:0043057; P:backward locomotion; IMP:WormBase.::GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030421; P:defecation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.
10P57428    543   FLGK_BUCAI Flagellar hook-associated protein ...755.3     32.7     27     56GO:0009424; C:bacterial-type flagellum hook; IEA:InterPro.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0009296; P:flagellum assembly; IEA:InterPro.
11Q55G98    878   Y7758_DICDI von Willebrand factor A domain-co...346.8     32.3     47     59
12O74227    353   GPA1_COCHE Guanine nucleotide-binding protein...1258.9     32     25     48
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEA:InterPro.
records
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