Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL098C
Length:
194
Number of sequences:
5887
Description:
YDL098C SNU23 SGDID:S000002256, Chr IV from 285165-284581, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12368    194   SNU23_YEAST 23 kDa U4/U6.U5 small nuclear rib...1949e-143     402     100     100GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
2Q09776    173   SNU23_SCHPO U4/U6.U5 small nuclear ribonucleo...1500.000000001     57.8     29     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
3P34670    407   YO14_CAEEL Putative zinc finger protein ZK686...2120.00005     46.2     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
4Q9CPW7    199   ZMAT2_MOUSE Zinc finger matrin-type protein 2...1020.0003     43.9     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
5Q96NC0    199   ZMAT2_HUMAN Zinc finger matrin-type protein 2...1020.0003     43.9     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
6Q5H9K5    638   ZMAT1_HUMAN Zinc finger matrin-type protein 1...340.88     33.9     41     56GO:0005634; C:nucleus; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
7Q9C0D4    1074   Z518B_HUMAN Zinc finger protein 518B OS=Homo ...393.2     32.3     49     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8P53863    590   JJJ1_YEAST J protein JJJ1 OS=Saccharomyces ce...323.9     32     44     59GO:0005829; C:cytosol; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; IMP:SGD.
GO:0001671; F:ATPase activator activity; IDA:SGD.::GO:0031072; F:heat shock protein binding; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006897; P:endocytosis; IMP:SGD.::GO:0006457; P:protein folding; IEA:InterPro.::GO:0008361; P:regulation of cell size; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0000054; P:ribosomal subunit export from nucleus; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
9Q8M9V7    334   RPOA_CHAGL DNA-directed RNA polymerase subuni...745.2     31.2     28     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:InterPro.
10B2RRE4    1077   Z518B_MOUSE Zinc finger protein 518B OS=Mus m...396.7     31.2     44     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q06SH2    3707   YCF78_STIHE Uncharacterized membrane protein ...647.4     31.2     33     55GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
records
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