Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL090C
Length:
431
Number of sequences:
5887
Description:
YDL090C RAM1 SGDID:S000002248, Chr IV from 296329-295034, Genome Release 64-1-1, reverse complement, Verified ORF, "Beta subunit of the CAAX farnesyltransferase (FTase) that prenylates the a-factor mating pheromone and Ras proteins; required for the membrane localization of Ras proteins and a-factor; homolog of the mammalian FTase beta subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P22007    431   FNTB_YEAST Protein farnesyltransferase subuni...4310     901     100     100GO:0005965; C:protein farnesyltransferase complex; IDA:SGD.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004660; F:protein farnesyltransferase activity; IDA:SGD.
GO:0018343; P:protein farnesylation; IDA:SGD.
2P49355    437   FNTB_BOVIN Protein farnesyltransferase subuni...3911e-69     233     39     57
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004660; F:protein farnesyltransferase activity; IEA:EC.
3P49356    437   FNTB_HUMAN Protein farnesyltransferase subuni...3892e-69     233     40     56GO:0005875; C:microtubule associated complex; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004660; F:protein farnesyltransferase activity; IEA:EC.
GO:0018343; P:protein farnesylation; IDA:BHF-UCL.
4O13782    382   FNTB_SCHPO Protein farnesyltransferase subuni...3955e-69     229     39     52GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004660; F:protein farnesyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; NAS:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0018343; P:protein farnesylation; IDA:PomBase.::GO:0006612; P:protein targeting to membrane; IC:PomBase.::GO:0010958; P:regulation of amino acid import; IGI:PomBase.
5Q02293    437   FNTB_RAT Protein farnesyltransferase subunit ...3418e-69     231     42     59
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004660; F:protein farnesyltransferase activity; IDA:RGD.
GO:0045787; P:positive regulation of cell cycle; IMP:RGD.::GO:0051770; P:positive regulation of nitric-oxide synthase biosynthetic process; IMP:RGD.::GO:0034097; P:response to cytokine stimulus; IMP:RGD.::GO:0010035; P:response to inorganic substance; IMP:RGD.::GO:0014070; P:response to organic cyclic compound; IMP:RGD.
6Q8K2I1    437   FNTB_MOUSE Protein farnesyltransferase subuni...3411e-68     230     42     59
GO:0004311; F:farnesyltranstransferase activity; IMP:MGI.::GO:0004660; F:protein farnesyltransferase activity; IEA:EC.
GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0048146; P:positive regulation of fibroblast proliferation; IMP:MGI.::GO:0042060; P:wound healing; IMP:MGI.
7Q55D51    500   FNTB_DICDI Protein farnesyltransferase subuni...3632e-54     194     35     56GO:0005965; C:protein farnesyltransferase complex; ISS:dictyBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004660; F:protein farnesyltransferase activity; ISS:dictyBase.
GO:0018343; P:protein farnesylation; ISS:dictyBase.
8Q04903    419   FNTB_PEA Protein farnesyltransferase subunit ...2298e-52     185     41     64
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004660; F:protein farnesyltransferase activity; IEA:EC.
9Q38920    482   FNTB_ARATH Protein farnesyltransferase subuni...3029e-49     178     37     60
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004660; F:protein farnesyltransferase activity; IEA:EC.
GO:0009788; P:negative regulation of abscisic acid mediated signaling pathway; IMP:TAIR.::GO:0018342; P:protein prenylation; IMP:TAIR.::GO:0009934; P:regulation of meristem structural organization; IMP:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IMP:TAIR.::GO:0009414; P:response to water deprivation; IMP:TAIR.
10O93830    341   PGTB2_CANAX Geranylgeranyl transferase type-2...3661e-37     144     28     48
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; IEA:EC.
11B0G172    339   PGTB2_DICDI Probable geranylgeranyl transfera...2445e-35     137     35     53GO:0005968; C:Rab-protein geranylgeranyltransferase complex; ISS:dictyBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; ISS:dictyBase.
GO:0018344; P:protein geranylgeranylation; ISS:dictyBase.
12P41992    335   GGTB2_CAEEL Probable geranylgeranyl transfera...1920.00000002     59.3     26     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; IEA:EC.
GO:0008219; P:cell death; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
13Q5E9B3    331   PGTB2_BOVIN Geranylgeranyl transferase type-2...3102e-32     129     30     48
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; IEA:EC.
14P53611    331   PGTB2_HUMAN Geranylgeranyl transferase type-2...3105e-32     128     29     48
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004663; F:Rab geranylgeranyltransferase activity; IEA:EC.
GO:0006464; P:protein modification process; NAS:UniProtKB.::GO:0007601; P:visual perception; TAS:ProtInc.
15Q08603    331   PGTB2_RAT Geranylgeranyl transferase type-2 s...3102e-30     124     29     48
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; IDA:RGD.
GO:0018344; P:protein geranylgeranylation; IDA:RGD.
16P20133    325   PGTB2_YEAST Geranylgeranyl transferase type-2...3196e-30     122     31     47GO:0005968; C:Rab-protein geranylgeranyltransferase complex; IDA:SGD.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004663; F:Rab geranylgeranyltransferase activity; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0018344; P:protein geranylgeranylation; IDA:SGD.::GO:0006612; P:protein targeting to membrane; IMP:SGD.
17P53612    339   PGTB2_MOUSE Geranylgeranyl transferase type-2...3106e-30     122     29     48
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; IEA:EC.
18P46960    311   PGTB2_SCHPO Geranylgeranyl transferase type-2...3101e-28     118     28     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005968; C:Rab-protein geranylgeranyltransferase complex; ISS:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004663; F:Rab geranylgeranyltransferase activity; ISS:PomBase.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0018344; P:protein geranylgeranylation; ISS:PomBase.::GO:0006612; P:protein targeting to membrane; IC:PomBase.
19Q8BUY9    377   PGTB1_MOUSE Geranylgeranyl transferase type-1...3149e-28     117     31     49
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; IEA:EC.
20Q5EAD5    377   PGTB1_BOVIN Geranylgeranyl transferase type-1...2622e-27     115     32     50
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
21P53610    377   PGTB1_RAT Geranylgeranyl transferase type-1 s...2623e-27     115     32     50GO:0005953; C:CAAX-protein geranylgeranyltransferase complex; IDA:RGD.
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; TAS:RGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051771; P:negative regulation of nitric-oxide synthase biosynthetic process; IMP:RGD.::GO:0045787; P:positive regulation of cell cycle; IMP:RGD.::GO:0008284; P:positive regulation of cell proliferation; IMP:RGD.::GO:0018344; P:protein geranylgeranylation; TAS:RGD.::GO:0034097; P:response to cytokine stimulus; IMP:RGD.
22P53609    377   PGTB1_HUMAN Geranylgeranyl transferase type-1...2635e-27     114     31     50GO:0005953; C:CAAX-protein geranylgeranyltransferase complex; TAS:ProtInc.
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; TAS:ProtInc.
GO:0018344; P:protein geranylgeranylation; TAS:ProtInc.
23Q55DA3    352   PGTB1_DICDI Geranylgeranyl transferase type-1...2252e-22     101     31     51
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
24P32434    355   PGTB1_SCHPO Geranylgeranyl transferase type-1...2414e-21     97.1     34     48GO:0005953; C:CAAX-protein geranylgeranyltransferase complex; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0004663; F:Rab geranylgeranyltransferase activity; IGI:PomBase.
GO:0034411; P:cell wall (1->3)-beta-D-glucan biosynthetic process; IMP:PomBase.::GO:0007163; P:establishment or maintenance of cell polarity; IMP:PomBase.::GO:0018344; P:protein geranylgeranylation; IC:PomBase.::GO:0006612; P:protein targeting to membrane; IC:PomBase.
25P18898    376   PGTB1_YEAST Geranylgeranyl transferase type-1...2440.00000002     59.7     26     44GO:0005953; C:CAAX-protein geranylgeranyltransferase complex; IDA:SGD.
GO:0004662; F:CAAX-protein geranylgeranyltransferase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006874; P:cellular calcium ion homeostasis; TAS:SGD.::GO:0030010; P:establishment of cell polarity; TAS:SGD.::GO:0018344; P:protein geranylgeranylation; IDA:SGD.::GO:0007264; P:small GTPase mediated signal transduction; TAS:SGD.
26B0BBT9    591   VATA_CHLTB V-type ATP synthase alpha chain OS...931.1     35.4     31     47GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
27B0B7M4    591   VATA_CHLT2 V-type ATP synthase alpha chain OS...931.1     35.4     31     47GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
28Q8CDC0    389   SPB13_MOUSE Serpin B13 OS=Mus musculus (Mouse...961.3     35     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IBA:RefGenome.
GO:0004867; F:serine-type endopeptidase inhibitor activity; IBA:RefGenome.
GO:0030162; P:regulation of proteolysis; IBA:RefGenome.
29Q7TTY8    242   TRMD_RHOBA tRNA (guanine-N(1)-)-methyltransfe...443.6     33.1     36     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0052906; F:tRNA (guanine(37)-N(1))-methyltransferase activity; IEA:EC.
30Q6MAJ5    593   VATA_PARUW V-type ATP synthase alpha chain OS...435.1     33.1     40     51GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
31Q9SXV6    757   CAS1_GLYGL Cycloartenol synthase OS=Glycyrrhi...397.6     32.7     46     62
GO:0016871; F:cycloartenol synthase activity; IEA:EC.
records
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