Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL088C
Length:
528
Number of sequences:
5887
Description:
YDL088C ASM4 SGDID:S000002246, Chr IV from 300003-298417, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q05166    528   NUP59_YEAST Nucleoporin ASM4 OS=Saccharomyces...5280     1078     100     100GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
2Q03790    475   NUP53_YEAST Nucleoporin NUP53 OS=Saccharomyce...5477e-39     152     29     47GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006607; P:NLS-bearing substrate import into nucleus; IMP:SGD.::GO:0007088; P:regulation of mitosis; IMP:SGD.::GO:0060188; P:regulation of protein desumoylation; IMP:SGD.
3O13838    371   NUP40_SCHPO Nucleoporin nup40 OS=Schizosaccha...1280.00004     49.7     27     43GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
4Q7SG09    827   MRD1_NEUCR Multiple RNA-binding domain-contai...490.25     37.7     31     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
5Q9JV52    354   DCUP_NEIMA Uroporphyrinogen decarboxylase OS=...645.3     33.1     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004853; F:uroporphyrinogen decarboxylase activity; IEA:EC.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
6Q9K041    354   DCUP_NEIMB Uroporphyrinogen decarboxylase OS=...645.3     33.1     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004853; F:uroporphyrinogen decarboxylase activity; IEA:EC.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
7A9M3L2    354   DCUP_NEIM0 Uroporphyrinogen decarboxylase OS=...645.5     33.1     31     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004853; F:uroporphyrinogen decarboxylase activity; IEA:EC.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
8Q96JQ2    1002   CLMN_HUMAN Calmin OS=Homo sapiens (Human). GN...1507     33.1     27     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
9P62283    3473   ASPM_AOTVO Abnormal spindle-like microcephaly...1607.2     33.5     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
records
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