Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL087C
Length:
261
Number of sequences:
5887
Description:
YDL087C LUC7 SGDID:S000002245, Chr IV from 300999-300214, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential protein associated with the U1 snRNP complex; splicing factor involved in recognition of 5' splice site; contains two zinc finger motifs; N-terminal zinc finger binds pre-mRNA"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07508    261   LUC7_YEAST Protein LUC7 OS=Saccharomyces cere...2610     543     100     100GO:0005685; C:U1 snRNP; IMP:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003729; F:mRNA binding; IMP:SGD.
GO:0006376; P:mRNA splice site selection; IGI:SGD.
2Q9USM4    264   LUC7_SCHPO U1 snRNP-associated protein usp106...2291e-43     154     40     59GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase.
3Q9CYI4    371   LUC7L_MOUSE Putative RNA-binding protein Luc7...2372e-32     127     34     56GO:0005634; C:nucleus; IDA:MGI.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0050733; F:RS domain binding; IPI:MGI.
GO:0045843; P:negative regulation of striated muscle tissue development; IDA:MGI.
4Q9NQ29    371   LUC7L_HUMAN Putative RNA-binding protein Luc7...2372e-32     127     34     56
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
5Q9Y383    392   LC7L2_HUMAN Putative RNA-binding protein Luc7...2351e-29     119     32     54
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
6Q7TNC4    392   LC7L2_MOUSE Putative RNA-binding protein Luc7...2353e-29     118     32     54
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
7Q5SUF2    432   LC7L3_MOUSE Luc7-like protein 3 OS=Mus muscul...2402e-22     99     33     52GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; ISS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0008380; P:RNA splicing; ISS:UniProtKB.
8Q5R8W6    432   LC7L3_PONAB Luc7-like protein 3 OS=Pongo abel...2402e-22     98.6     33     52GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; ISS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0008380; P:RNA splicing; ISS:UniProtKB.
9O95232    432   LC7L3_HUMAN Luc7-like protein 3 OS=Homo sapie...2402e-22     98.6     33     52GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IMP:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006915; P:apoptotic process; IMP:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IMP:UniProtKB.::GO:0008380; P:RNA splicing; IMP:UniProtKB.
10Q3SX41    432   LC7L3_BOVIN Luc7-like protein 3 OS=Bos taurus...2402e-22     98.6     33     52GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; ISS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0008380; P:RNA splicing; ISS:UniProtKB.
11Q09217    313   YP68_CAEEL Uncharacterized protein B0495.8 OS...2325e-17     82     26     49
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.
12Q54XQ8    360   LUC7L_DICDI Luc7-like protein OS=Dictyosteliu...2370.000000000000006     76.6     25     47GO:0005685; C:U1 snRNP; ISS:dictyBase.
GO:0003729; F:mRNA binding; ISS:UniProtKB.
GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:dictyBase.::GO:0006950; P:response to stress; ISS:UniProtKB.
13B5EI63    696   PNP_GEOBB Polyribonucleotide nucleotidyltrans...820.86     34.7     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
14C6E2P5    696   PNP_GEOSM Polyribonucleotide nucleotidyltrans...820.88     34.7     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
15Q58391    222   T2M1_METJA Type-2 restriction enzyme MjaI OS=...651.8     33.1     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009036; F:Type II site-specific deoxyribonuclease activity; IEA:EC.
GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
16Q5WVX1    89   MINE_LEGPL Cell division topological specific...471.8     31.6     30     62
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0032955; P:regulation of barrier septum assembly; IEA:InterPro.
17A5ICN0    89   MINE_LEGPC Cell division topological specific...471.8     31.6     30     62
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0032955; P:regulation of barrier septum assembly; IEA:InterPro.
18Q5X4I6    89   MINE_LEGPA Cell division topological specific...471.8     31.6     30     62
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0032955; P:regulation of barrier septum assembly; IEA:InterPro.
19P38583    81   YBM1_CARML Uncharacterized 9.1 kDa protein in...782.4     30.8     27     59
20B1MW28    436   SYS_LEUCK Serine--tRNA ligase OS=Leuconostoc ...1162.6     33.1     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004828; F:serine-tRNA ligase activity; IEA:EC.
GO:0006434; P:seryl-tRNA aminoacylation; IEA:InterPro.
21P32985    582   BPS2_ACIAM Protein bps2 OS=Acidianus ambivale...1168.5     31.6     24     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
records
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