Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL077C
Length:
1049
Number of sequences:
5887
Description:
YDL077C VAM6 SGDID:S000002235, Chr IV from 320120-316971, Genome Release 64-1-1, reverse complement, Verified ORF, "Vacuolar protein that plays a critical role in the tethering steps of vacuolar membrane fusion by facilitating guanine nucleotide exchange on small guanosine triphosphatase Ypt7p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q07468    1049   VAM6_YEAST Vacuolar morphogenesis protein 6 O...10490     2163     100     100GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0030897; C:HOPS complex; IPI:SGD.
GO:0017112; F:Rab guanyl-nucleotide exchange factor activity; IDA:SGD.
GO:0034727; P:piecemeal microautophagy of nucleus; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0035542; P:regulation of SNARE complex assembly; IDA:SGD.::GO:0032889; P:regulation of vacuole fusion, non-autophagic; IDA:SGD.::GO:0042144; P:vacuole fusion, non-autophagic; IMP:SGD.::GO:0016192; P:vesicle-mediated transport; IMP:SGD.
2Q96JC1    886   VPS39_HUMAN Vam6/Vps39-like protein OS=Homo s...4637e-30     131     27     44GO:0030897; C:HOPS complex; IDA:UniProtKB.::GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
3Q8R5L3    886   VPS39_MOUSE Vam6/Vps39-like protein OS=Mus mu...4632e-29     130     27     44GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
4O13955    905   VAM6_SCHPO Vacuolar morphogenesis protein 6 O...4862e-26     120     26     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0000329; C:fungal-type vacuole membrane; ISS:PomBase.::GO:0030897; C:HOPS complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0017112; F:Rab guanyl-nucleotide exchange factor activity; ISS:PomBase.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0042144; P:vacuole fusion, non-autophagic; ISS:PomBase.::GO:0048278; P:vesicle docking; ISS:PomBase.
5A7MB11    859   TGFA1_BOVIN Transforming growth factor-beta r...3150.0000000003     67.8     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
6Q3UR70    860   TGFA1_MOUSE Transforming growth factor-beta r...3330.000000002     65.9     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
7Q8WUH2    860   TGFA1_HUMAN Transforming growth factor-beta r...3300.000000002     65.9     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IDA:UniProtKB.
GO:0046332; F:SMAD binding; IDA:UniProtKB.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.::GO:0005160; F:transforming growth factor beta receptor binding; IDA:UniProtKB.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
8A4IG72    863   TGFA1_DANRE Transforming growth factor-beta r...3790.00000009     60.1     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
9Q618H8    898   VPS41_CAEBR Vacuolar protein sorting-associat...1860.18     39.7     23     46GO:0005773; C:vacuole; ISS:GOC.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0006624; P:vacuolar protein processing; ISS:UniProtKB.::GO:0007034; P:vacuolar transport; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
10Q68XR8    430   TILS_RICTY tRNA(Ile)-lysidine synthase OS=Ric...605.2     34.7     35     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016879; F:ligase activity, forming carbon-nitrogen bonds; IEA:InterPro.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
11B8G736    824   LON_CHLAD Lon protease OS=Chloroflexus aggreg...1547.4     34.3     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
records
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