UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YDL060W

Length:

788

Number of sequences:

5887

Description:

YDL060W TSR1 SGDID:S000002218, Chr IV from 341619-343985, Genome Release 64-1-1, Verified ORF, "Protein required for processing of 20S pre-rRNA in the cytoplasm; associates with pre-40S ribosomal particles; inhibits the premature association of 60S subunits with assembling 40S subunits in the cytoplasm; similar to Bms1p"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	Q07381	788	TSR1_YEAST Ribosome biogenesis protein TSR1 O...	788	0	1631	100	100	GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0043021; F:ribonucleoprotein complex binding; IDA:SGD.
									GO:0006364; P:rRNA processing; IMP:SGD.
2	O13956	783	TSR1_SCHPO Ribosome biogenesis protein tsr1 h...	798	0	557	41	60	GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.
									GO:0043021; F:ribonucleoprotein complex binding; ISS:PomBase.
									GO:0006364; P:rRNA processing; ISS:PomBase.
3	Q9VP47	814	TSR1_DROME Pre-rRNA-processing protein TSR1 h...	836	3e-104	345	30	49	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0005488; F:binding; IEA:InterPro.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
4	Q5SWD9	803	TSR1_MOUSE Pre-rRNA-processing protein TSR1 h...	811	7e-97	325	31	51	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
5	Q5XGY1	815	TSR1_XENLA Pre-rRNA-processing protein TSR1 h...	808	1e-96	325	31	52	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
6	Q2NL82	804	TSR1_HUMAN Pre-rRNA-processing protein TSR1 h...	802	3e-90	307	31	51	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
7	Q19329	785	TSR1_CAEEL Pre-rRNA-processing protein TSR1 h...	809	5e-90	306	29	50	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0042255; P:ribosome assembly; ISS:UniProtKB.
8	Q5R434	805	TSR1_PONAB Pre-rRNA-processing protein TSR1 h...	811	1e-88	303	30	51	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
9	Q61WR2	788	TSR1_CAEBR Pre-rRNA-processing protein TSR1 h...	813	4e-88	301	28	49	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
10	Q54YA7	826	TSR1_DICDI Pre-rRNA-processing protein TSR1 h...	320	4e-41	165	31	54	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
11	O94653	1121	BMS1_SCHPO Ribosome biogenesis protein bms1 O...	184	0.22	38.9	20	42	GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005819; C:spindle; IDA:PomBase.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; ISS:PomBase.::GO:0003924; F:GTPase activity; IEA:InterPro.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:PomBase.
12	Q14692	1282	BMS1_HUMAN Ribosome biogenesis protein BMS1 h...	198	0.0007	47	20	43	GO:0005730; C:nucleolus; ISS:UniProtKB.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:InterPro.::GO:0003924; F:GTPase activity; IEA:InterPro.
									GO:0042255; P:ribosome assembly; ISS:UniProtKB.
13	Q08965	1183	BMS1_YEAST Ribosome biogenesis protein BMS1 O...	270	0.064	40.4	23	41	GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IMP:SGD.::GO:0003924; F:GTPase activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0034511; F:U3 snoRNA binding; IDA:SGD.
									GO:0042255; P:ribosome assembly; IDA:SGD.::GO:0006364; P:rRNA processing; IDA:SGD.
14	P82125	301	AKCL2_PIG 1,5-anhydro-D-fructose reductase OS...	72	1.7	35.4	36	53
									GO:0050571; F:1,5-anhydro-D-fructose reductase activity; IEA:EC.
15	Q12019	4910	MDN1_YEAST Midasin OS=Saccharomyces cerevisia...	43	3.1	35.4	42	60	GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; IEA:InterPro.
									GO:0006461; P:protein complex assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
16	Q47DK8	544	GUAA_DECAR GMP synthase [glutamine-hydrolyzin...	68	4.6	34.3	31	51
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003922; F:GMP synthase (glutamine-hydrolyzing) activity; IEA:EC.
									GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.::GO:0006177; P:GMP biosynthetic process; IEA:UniProtKB-KW.
17	O54988	1233	SLK_MOUSE STE20-like serine/threonine-protein...	232	4.7	34.7	25	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.
									GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006289; P:nucleotide-excision repair; IEA:InterPro.

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