Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL051W
Length:
275
Number of sequences:
5887
Description:
YDL051W LHP1 SGDID:S000002209, Chr IV from 363952-364779, Genome Release 64-1-1, Verified ORF, "RNA binding protein required for maturation of tRNA and U6 snRNA precursors; acts as a molecular chaperone for RNAs transcribed by polymerase III; homologous to human La (SS-B) autoantigen"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P33399    275   LHP1_YEAST La protein homolog OS=Saccharomyce...2750     560     100     100GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000049; F:tRNA binding; IDA:SGD.
GO:0008033; P:tRNA processing; IMP:SGD.
2P87058    298   LAH1_SCHPO La protein homolog OS=Schizosaccha...2165e-35     132     39     59GO:0005634; C:nucleus; IDA:PomBase.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0034307; P:regulation of ascospore formation; IMP:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:PomBase.::GO:0042779; P:tRNA 3'-trailer cleavage; IGI:PomBase.
3Q26457    383   LA_AEDAL La protein homolog OS=Aedes albopict...1863e-17     84     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
4P28048    428   LAA_XENLA Lupus La protein homolog A OS=Xenop...1910.0000000000001     73.6     25     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
5Q7ZWE3    555   LARP7_DANRE La-related protein 7 OS=Danio rer...1560.0000000000003     72.8     32     52GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
6P05455    408   LA_HUMAN Lupus La protein OS=Homo sapiens (Hu...1640.0000000000004     72     26     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; TAS:ProtInc.
GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000049; F:tRNA binding; TAS:ProtInc.
GO:0008334; P:histone mRNA metabolic process; TAS:ProtInc.::GO:0006400; P:tRNA modification; TAS:ProtInc.
7Q4R627    581   LARP7_MACFA La-related protein 7 OS=Macaca fa...1560.0000000000005     72.4     34     52GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
8Q4G0J3    582   LARP7_HUMAN La-related protein 7 OS=Homo sapi...1560.0000000000005     72     34     52GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
9P38656    415   LA_RAT Lupus La protein homolog OS=Rattus nor...1620.0000000000009     71.2     27     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008033; P:tRNA processing; IMP:RGD.
10P32067    415   LA_MOUSE Lupus La protein homolog OS=Mus musc...1620.0000000000009     71.2     27     54GO:0005634; C:nucleus; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006396; P:RNA processing; IEA:InterPro.
11Q28G87    593   LARP7_XENTR La-related protein 7 OS=Xenopus t...1560.000000000001     70.9     33     51GO:0005634; C:nucleus; IEA:InterPro.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
12P10881    404   LA_BOVIN Lupus La protein homolog OS=Bos taur...1640.000000000002     70.1     26     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
13P40796    390   LA_DROME La protein homolog OS=Drosophila mel...1670.000000000002     70.1     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0008098; F:5S rRNA primary transcript binding; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
14Q5XI01    571   LARP7_RAT La-related protein 7 OS=Rattus norv...1560.000000000002     70.5     33     51GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
15Q05CL8    570   LARP7_MOUSE La-related protein 7 OS=Mus muscu...1560.000000000007     68.6     33     51GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
16P28049    427   LAB_XENLA Lupus La protein homolog B OS=Xenop...1910.00000000005     65.9     25     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
17Q9BRS8    491   LARP6_HUMAN La-related protein 6 OS=Homo sapi...1500.0001     47     26     45GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
18Q8BWW4    719   LARP4_MOUSE La-related protein 4 OS=Mus muscu...780.0001     47     40     58
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.
19Q9P6K0    475   YLA3_SCHPO Uncharacterized HTH La-type RNA-bi...820.0001     46.2     32     60GO:0005829; C:cytosol; IDA:PomBase.::GO:0005844; C:polysome; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.
20Q71RC2    724   LARP4_HUMAN La-related protein 4 OS=Homo sapi...780.0002     45.8     38     58
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; IMP:UniProtKB.
21Q12034    447   SLF1_YEAST Protein SLF1 OS=Saccharomyces cere...460.0003     45.4     48     65GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0006878; P:cellular copper ion homeostasis; IPI:SGD.::GO:0006417; P:regulation of translation; IMP:SGD.
22Q8BN59    492   LARP6_MOUSE La-related protein 6 OS=Mus muscu...850.0006     44.7     32     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
23Q6A0A2    741   LAR4B_MOUSE La-related protein 4B OS=Mus musc...770.0006     44.7     36     57
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
24Q6PKG0    1096   LARP1_HUMAN La-related protein 1 OS=Homo sapi...760.0006     44.7     36     61
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
25Q92615    738   LAR4B_HUMAN La-related protein 4B OS=Homo sap...770.0007     44.3     36     57
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
26Q6ZQ58    1072   LARP1_MOUSE La-related protein 1 OS=Mus muscu...760.001     43.9     36     61
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
27Q9VAW5    1673   LARP_DROME La-related protein OS=Drosophila m...770.003     42.7     34     57GO:0005829; C:cytosol; IDA:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000001; P:mitochondrion inheritance; IMP:FlyBase.::GO:0035071; P:salivary gland cell autophagic cell death; IEP:FlyBase.::GO:0007053; P:spindle assembly involved in male meiosis; IMP:FlyBase.::GO:0035186; P:syncytial blastoderm mitotic cell cycle; IMP:FlyBase.
28P25567    434   SRO9_YEAST RNA-binding protein SRO9 OS=Saccha...460.005     41.6     39     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005844; C:polysome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0002181; P:cytoplasmic translation; IPI:SGD.
29Q9I7T7    1531   Y1505_DROME La-related protein CG11505 OS=Dro...690.012     40.8     35     58
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
30Q659C4    914   LAR1B_HUMAN La-related protein 1B OS=Homo sap...620.012     40.4     37     63
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
31B5DGI7    175   RBM8A_SALSA RNA-binding protein 8A OS=Salmo s...600.33     35     28     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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