Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL029W
Length:
391
Number of sequences:
5887
Description:
YDL029W ARP2 SGDID:S000002187, Chr IV from 399340-399361,399485-400638, Genome Release 64-1-1, Verified ORF, "Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571A3M1G3    1357   RPOB_ACIBT DNA-directed RNA polymerase subuni...1713.9     33.5     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
572B2VG96    1342   RPOB_ERWT9 DNA-directed RNA polymerase subuni...1653.9     33.5     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
573Q89B20    1343   RPOB_BUCBP DNA-directed RNA polymerase subuni...523.9     33.5     40     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
574Q1Q8P9    1372   RPOB_PSYCK DNA-directed RNA polymerase subuni...1734     33.5     30     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
575Q1QN44    1380   RPOB_NITHX DNA-directed RNA polymerase subuni...1764.2     33.5     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
576A3N325    1342   RPOB_ACTP2 DNA-directed RNA polymerase subuni...1654.5     33.5     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
577P47169    1442   MET5_YEAST Sulfite reductase [NADPH] subunit ...1554.9     33.1     26     46GO:0005737; C:cytoplasm; IDA:SGD.::GO:0009337; C:sulfite reductase complex (NADPH); IDA:SGD.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0010181; F:FMN binding; IEA:InterPro.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0004783; F:sulfite reductase (NADPH) activity; IEA:EC.
GO:0019344; P:cysteine biosynthetic process; IEA:UniProtKB-KW.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.::GO:0000103; P:sulfate assimilation; IMP:SGD.
578Q089R1    1343   RPOB_SHEFN DNA-directed RNA polymerase subuni...1654.9     33.1     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
579Q12SW6    1343   RPOB_SHEDO DNA-directed RNA polymerase subuni...1655.2     33.1     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
580Q07KK7    1373   RPOB_RHOP5 DNA-directed RNA polymerase subuni...1765.2     33.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
581Q82WE9    385   SELU_NITEU tRNA 2-selenouridine synthase OS=N...655.2     32.7     34     45
GO:0043828; F:tRNA 2-selenouridine synthase activity; IEA:InterPro.
GO:0070329; P:tRNA seleno-modification; IEA:InterPro.
582Q8KWX2    1380   RPOB_EHRCR DNA-directed RNA polymerase subuni...1825.3     33.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
583A8G1F5    1343   RPOB_SHESH DNA-directed RNA polymerase subuni...525.3     33.1     40     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
584Q3SSY0    1380   RPOB_NITWN DNA-directed RNA polymerase subuni...1765.4     33.1     26     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
585Q5HC05    1380   RPOB_EHRRW DNA-directed RNA polymerase subuni...1875.5     33.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
586Q5FFD9    1380   RPOB_EHRRG DNA-directed RNA polymerase subuni...1875.5     33.1     27     40
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
587A9R0H8    1342   RPOB_YERPG DNA-directed RNA polymerase subuni...2136     33.1     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
588B4U8M6    425   GSA_HYDS0 Glutamate-1-semialdehyde 2,1-aminom...426.2     32.7     43     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0042286; F:glutamate-1-semialdehyde 2,1-aminomutase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.::GO:0008483; F:transaminase activity; IEA:InterPro.
GO:0006779; P:porphyrin-containing compound biosynthetic process; IEA:UniProtKB-KW.
589Q211D8    1373   RPOB_RHOPB DNA-directed RNA polymerase subuni...1766.5     32.7     26     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
590B1JJJ9    1342   RPOB_YERPY DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
591Q66FQ2    1342   RPOB_YERPS DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
592A4TS29    1342   RPOB_YERPP DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
593Q1CN78    1342   RPOB_YERPN DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
594Q8ZAP5    1342   RPOB_YERPE DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
595B2K113    1342   RPOB_YERPB DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
596Q1C1U1    1342   RPOB_YERPA DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
597A7FNI3    1342   RPOB_YERP3 DNA-directed RNA polymerase subuni...2136.6     32.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
598Q2NWR6    1342   RPOB_SODGM DNA-directed RNA polymerase subuni...1776.6     32.7     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
599B4EYU9    1342   RPOB_PROMH DNA-directed RNA polymerase subuni...406.8     32.7     43     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
600Q3ILP9    1341   RPOB_PSEHT DNA-directed RNA polymerase subuni...407.2     32.7     43     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
601C4LBV2    1342   RPOB_TOLAT DNA-directed RNA polymerase subuni...1657.2     32.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
records
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