Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL029W
Length:
391
Number of sequences:
5887
Description:
YDL029W ARP2 SGDID:S000002187, Chr IV from 399340-399361,399485-400638, Genome Release 64-1-1, Verified ORF, "Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541A5F3P5    1341   RPOB_VIBC3 DNA-directed RNA polymerase subuni...1651.1     35.4     28     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
542B8EBL2    1343   RPOB_SHEB2 DNA-directed RNA polymerase subuni...1651.1     35.4     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
543B0VDI0    1362   RPOB_ACIBY DNA-directed RNA polymerase subuni...1761.2     35     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
544B2I1Z1    1362   RPOB_ACIBC DNA-directed RNA polymerase subuni...1761.2     35     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
545B7I360    1362   RPOB_ACIB5 DNA-directed RNA polymerase subuni...1761.2     35     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
546B7H1J8    1362   RPOB_ACIB3 DNA-directed RNA polymerase subuni...1761.2     35     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
547B0VLZ6    1362   RPOB_ACIBS DNA-directed RNA polymerase subuni...1761.2     35     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
548A6WHS1    1343   RPOB_SHEB8 DNA-directed RNA polymerase subuni...1651.2     35     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
549A3DB95    1343   RPOB_SHEB5 DNA-directed RNA polymerase subuni...1651.2     35     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
550Q87KQ4    1342   RPOB_VIBPA DNA-directed RNA polymerase subuni...1651.2     35     28     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
551Q8EK74    1345   RPOB_SHEON DNA-directed RNA polymerase subuni...1651.6     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
552A0KRL7    1345   RPOB_SHESA DNA-directed RNA polymerase subuni...1651.6     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
553Q0I0B2    1345   RPOB_SHESR DNA-directed RNA polymerase subuni...1651.7     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
554Q0HNU4    1345   RPOB_SHESM DNA-directed RNA polymerase subuni...1651.7     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
555Q7MGR8    1342   RPOB_VIBVY DNA-directed RNA polymerase subuni...1651.9     34.7     27     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
556Q8DD20    1342   RPOB_VIBVU DNA-directed RNA polymerase subuni...1651.9     34.7     27     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
557B1KMZ0    1343   RPOB_SHEWM DNA-directed RNA polymerase subuni...1792     34.7     28     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
558A1REA7    1343   RPOB_SHESW DNA-directed RNA polymerase subuni...1652     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
559A4YBZ0    1343   RPOB_SHEPC DNA-directed RNA polymerase subuni...1652     34.7     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
560B2FQ38    1388   RPOB_STRMK DNA-directed RNA polymerase subuni...1792     34.3     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
561B4SKV6    1384   RPOB_STRM5 DNA-directed RNA polymerase subuni...1792.1     34.3     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
562A7MXF1    1342   RPOB_VIBHB DNA-directed RNA polymerase subuni...402.3     34.3     45     63
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
563A4W5A7    1342   RPOB_ENT38 DNA-directed RNA polymerase subuni...1652.3     34.3     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
564A8G8E7    1342   RPOB_SERP5 DNA-directed RNA polymerase subuni...1652.4     34.3     27     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
565A3Q975    1343   RPOB_SHELP DNA-directed RNA polymerase subuni...1652.5     34.3     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
566P41184    1342   RPOB_BUCAP DNA-directed RNA polymerase subuni...522.7     33.9     40     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
567P85937    32   ACT2_PSEMZ Actin-2 OS=Pseudotsuga menziesii (...393.1     31.2     41     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
568Q6FF90    1362   RPOB_ACIAD DNA-directed RNA polymerase subuni...1763.1     33.9     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
569Q4FQH3    1372   RPOB_PSYA2 DNA-directed RNA polymerase subuni...1733.2     33.9     30     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
570A4YSI1    1372   RPOB_BRASO DNA-directed RNA polymerase subuni...1763.4     33.9     27     39
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
571A3M1G3    1357   RPOB_ACIBT DNA-directed RNA polymerase subuni...1713.9     33.5     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
records
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