Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL029W
Length:
391
Number of sequences:
5887
Description:
YDL029W ARP2 SGDID:S000002187, Chr IV from 399340-399361,399485-400638, Genome Release 64-1-1, Verified ORF, "Essential component of the Arp2/3 complex, which is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q9C9B2    145   ARP4A_ARATH Actin-related protein 4A OS=Arabi...1330.0000000007     61.2     30     49
512A2ZP58    575   ARP5_ORYSJ Actin-related protein 5 OS=Oryza s...1060.000000001     63.5     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
513A2WKK5    575   ARP5_ORYSI Actin-related protein 5 OS=Oryza s...1060.000000001     63.5     32     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
514Q0IEG8    562   ARP8_AEDAE Actin-related protein 8 OS=Aedes a...1990.000000002     62.8     25     45GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB.
GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB.
515P85911    45   ACT1_PSEMZ Actin-1 OS=Pseudotsuga menziesii (...450.0000004     51.2     42     71GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
516Q9US07    662   ARP8_SCHPO Probable actin-related protein 8 O...8910     32     21     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0031011; C:Ino80 complex; IDA:PomBase.
517A2XQX0    586   ARP9_ORYSI Actin-related protein 9 OS=Oryza s...4070.000002     53.1     21     42
518Q0JF03    586   ARP9_ORYSJ Actin-related protein 9 OS=Oryza s...4070.000004     52.4     20     42
519Q54JY2    475   ARP10_DICDI Actin-related protein 10 OS=Dicty...4240.000006     51.6     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005869; C:dynactin complex; ISS:dictyBase.
GO:0007018; P:microtubule-based movement; ISS:dictyBase.
520Q12406    477   ARP7_YEAST Actin-related protein 7 OS=Sacchar...1830.002     43.9     22     43GO:0016586; C:RSC complex; IDA:UniProtKB.::GO:0016514; C:SWI/SNF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; IMP:UniProtKB.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
521Q12386    881   ARP8_YEAST Actin-like protein ARP8 OS=Sacchar...870.007     42.4     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0031011; C:Ino80 complex; IPI:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.
GO:0006338; P:chromatin remodeling; IMP:SGD.::GO:0006312; P:mitotic recombination; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006974; P:response to DNA damage stimulus; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
522Q9LSW2    596   ARP9_ARATH Actin-related protein 9 OS=Arabido...1150.037     39.7     29     50
523Q9VX09    607   ARP8_DROME Actin-related protein 8 OS=Drosoph...1000.28     37     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0031011; C:Ino80 complex; IDA:FlyBase.
GO:0006338; P:chromatin remodeling; IMP:UniProtKB.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.
524A1TYJ0    1358   RPOB_MARAV DNA-directed RNA polymerase subuni...1680.021     40.8     30     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
525A1S211    1342   RPOB_SHEAM DNA-directed RNA polymerase subuni...1660.084     38.9     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
526Q04549    284   ARP10_YEAST Actin-like protein ARP10 OS=Sacch...920.21     37     17     51GO:0005737; C:cytoplasm; IDA:SGD.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007067; P:mitosis; IGI:SGD.
527Q0VSM2    1380   RPOB_ALCBS DNA-directed RNA polymerase subuni...1770.21     37.7     29     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
528Q058E5    1343   RPOB_BUCCC DNA-directed RNA polymerase subuni...1770.25     37.4     27     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
529C3MAX2    1380   RPOB_RHISN DNA-directed RNA polymerase subuni...1910.36     37     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
530P57146    1342   RPOB_BUCAI DNA-directed RNA polymerase subuni...1660.37     37     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
531B8D8J6    1342   RPOB_BUCA5 DNA-directed RNA polymerase subuni...1660.37     37     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
532B8D6V0    1342   RPOB_BUCAT DNA-directed RNA polymerase subuni...1660.39     36.6     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
533A6W399    1366   RPOB_MARMS DNA-directed RNA polymerase subuni...1910.58     36.2     28     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
534A8GYW9    1343   RPOB_SHEPA DNA-directed RNA polymerase subuni...1650.62     36.2     27     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
535A6U851    1380   RPOB_SINMW DNA-directed RNA polymerase subuni...1910.79     35.8     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
536Q92QH7    1380   RPOB_RHIME DNA-directed RNA polymerase subuni...1760.93     35.4     27     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
537P39751    333   MBL_BACSU MreB-like protein OS=Bacillus subti...2570.96     35     22     41
GO:0005524; F:ATP binding; IEA:InterPro.
GO:0000902; P:cell morphogenesis; IEA:InterPro.
538B8CNC5    1343   RPOB_SHEPW DNA-directed RNA polymerase subuni...1650.96     35.4     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
539Q9KV30    1341   RPOB_VIBCH DNA-directed RNA polymerase subuni...1651     35.4     28     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
540Q24733    33   ACT_DICVI Actin OS=Dictyocaulus viviparus (Bo...261     32.7     54     77GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
541A5F3P5    1341   RPOB_VIBC3 DNA-directed RNA polymerase subuni...1651.1     35.4     28     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
records
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