Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL014W
Length:
327
Number of sequences:
5887
Description:
YDL014W NOP1 SGDID:S000002172, Chr IV from 427364-428347, Genome Release 64-1-1, Verified ORF, "Nucleolar protein, component of the small subunit processome complex, which is required for processing of pre-18S rRNA; has similarity to mammalian fibrillarin"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q83BY4    212   RLME_COXBU Ribosomal RNA large subunit methyl...921     34.3     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
92A9KGE6    212   RLME_COXBN Ribosomal RNA large subunit methyl...921     34.3     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
93B6IZD5    212   RLME_COXB2 Ribosomal RNA large subunit methyl...921     34.3     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
94A9N8M5    212   RLME_COXBR Ribosomal RNA large subunit methyl...891     34.3     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
95Q3B8Q1    782   DDX21_RAT Nucleolar RNA helicase 2 OS=Rattus ...761.6     34.3     42     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
96B6J802    212   RLME_COXB1 Ribosomal RNA large subunit methyl...891.6     33.5     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
97Q14444    709   CAPR1_HUMAN Caprin-1 OS=Homo sapiens (Human)....651.6     34.3     40     45GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
98A8TX70    2615   CO6A5_HUMAN Collagen alpha-5(VI) chain OS=Hom...872.8     33.9     36     40GO:0005581; C:collagen; IEA:UniProtKB-KW.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
99Q74FL9    260   THIG_GEOSL Thiazole synthase OS=Geobacter sul...1342.6     33.1     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW.
100Q7ZY47    947   DDX42_XENLA ATP-dependent RNA helicase DDX42 ...793.2     33.5     41     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
101Q12816    1431   TROP_HUMAN Trophinin OS=Homo sapiens (Human)....693.3     33.5     42     48GO:0005887; C:integral to plasma membrane; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007566; P:embryo implantation; TAS:ProtInc.::GO:0007156; P:homophilic cell adhesion; TAS:ProtInc.
102Q1LZB6    708   CAPR1_BOVIN Caprin-1 OS=Bos taurus (Bovine). ...343.6     33.1     59     62GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0017148; P:negative regulation of translation; ISS:UniProtKB.::GO:0050775; P:positive regulation of dendrite morphogenesis; ISS:UniProtKB.::GO:0061003; P:positive regulation of dendritic spine morphogenesis; ISS:UniProtKB.
103A0LGZ0    197   RLME_SYNFM Ribosomal RNA large subunit methyl...364.4     32.3     42     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
104Q3SQN7    230   RLME_NITWN Ribosomal RNA large subunit methyl...1035     32.3     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
105Q1QKB6    228   RLME_NITHX Ribosomal RNA large subunit methyl...1216.5     32     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0001510; P:RNA methylation; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
106Q9NR30    783   DDX21_HUMAN Nucleolar RNA helicase 2 OS=Homo ...746.5     32.3     41     47GO:0005730; C:nucleolus; IDA:HPA.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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