Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL008W
Length:
165
Number of sequences:
5887
Description:
YDL008W APC11 SGDID:S000002166, Chr IV from 433497-433994, Genome Release 64-1-1, Verified ORF, "Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241D3ZQG6    744   TRIM2_RAT Tripartite motif-containing protein...555.7     30.8     29     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; IMP:UniProtKB.
242Q9SPL2    334   CIP8_ARATH E3 ubiquitin-protein ligase CIP8 O...335.7     30.8     48     58GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016567; P:protein ubiquitination; IDA:TAIR.
243Q8AWW4    404   RN128_XENLA E3 ubiquitin-protein ligase RNF12...695.8     30.8     30     41GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
244Q9LZV8    159   ATL74_ARATH RING-H2 finger protein ATL74 OS=A...305.8     30.4     43     60GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
245Q7XLY8    383   ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g...385.8     30.8     39     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
246Q84W40    404   ATL11_ARATH RING-H2 finger protein ATL11 OS=A...605.9     30.8     32     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
247Q9ULT6    936   ZNRF3_HUMAN Zinc/RING finger protein 3 OS=Hom...585.9     30.8     33     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
248Q8VC56    488   RNF8_MOUSE E3 ubiquitin-protein ligase RNF8 O...705.9     30.8     27     44GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0030496; C:midbody; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; IMP:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; IMP:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
249Q5SSZ7    913   ZNRF3_MOUSE Zinc/RING finger protein 3 OS=Mus...356     30.8     40     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
250Q9SLC4    217   ATL40_ARATH RING-H2 finger protein ATL40 OS=A...276.1     30.4     44     59GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
251Q7ZX20    540   RNF8A_XENLA E3 ubiquitin-protein ligase RNF8-...646.4     30.8     31     47GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:InterPro.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
252Q9C1X4    513   YKW3_SCHPO Uncharacterized RING finger protei...326.4     30.8     47     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
253Q6Y290    419   GOLI_RAT E3 ubiquitin-protein ligase RNF130 O...736.5     30.8     30     37GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
254Q6AY01    381   RN133_RAT E3 ubiquitin-protein ligase RNF133 ...596.5     30.8     31     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
255Q09600    980   VPS11_CAEEL Vacuolar protein sorting-associat...466.6     30.8     37     48GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008219; P:cell death; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
256Q8VEM1    419   GOLI_MOUSE E3 ubiquitin-protein ligase RNF130...736.6     30.8     30     37GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016021; C:integral to membrane; NAS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
257Q8BGI1    148   RNF24_MOUSE RING finger protein 24 OS=Mus mus...566.7     30     29     48GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
258Q9LUL6    204   ATL61_ARATH Putative RING-H2 finger protein A...396.8     30.4     38     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
259Q3UIW8    156   RN224_MOUSE RING finger protein 224 OS=Mus mu...636.8     30     30     48
GO:0008270; F:zinc ion binding; IEA:InterPro.
260Q9EPZ8    682   RN103_RAT E3 ubiquitin-protein ligase RNF103 ...567     30.8     32     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
261Q9SUS5    157   RHA1B_ARATH E3 ubiquitin-protein ligase RHA1B...617.1     30     30     43
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.
262Q9LS99    220   ATL77_ARATH RING-H2 finger protein ATL77 OS=A...477.2     30.4     40     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
263Q9FHG8    210   ATL50_ARATH Putative RING-H2 finger protein A...647.3     30     30     38GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
264Q9R1W3    683   RN103_MOUSE E3 ubiquitin-protein ligase RNF10...567.4     30.4     32     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
265Q86XS8    419   GOLI_HUMAN E3 ubiquitin-protein ligase RNF130...737.9     30.4     30     37GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:HPA.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
266Q9Y225    148   RNF24_HUMAN RING finger protein 24 OS=Homo sa...568.3     29.6     29     48GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
267P38823    416   DMA1_YEAST E3 ubiquitin-protein ligase DMA1 O...418.6     30.4     32     51GO:0005737; C:cytoplasm; IDA:SGD.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000132; P:establishment of mitotic spindle orientation; IGI:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:SGD.::GO:0051865; P:protein autoubiquitination; IDA:SGD.::GO:0000921; P:septin ring assembly; IGI:SGD.
268Q8N7C7    305   RN148_HUMAN RING finger protein 148 OS=Homo s...618.8     30     33     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
269Q08CG8    448   RNF44_DANRE RING finger protein 44 OS=Danio r...328.9     30.4     41     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
270Q3JCM3    407   SYY_NITOC Tyrosine--tRNA ligase OS=Nitrosococ...649.7     30     27     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004831; F:tyrosine-tRNA ligase activity; IEA:EC.
GO:0006437; P:tyrosyl-tRNA aminoacylation; IEA:InterPro.
271Q9LZJ6    257   ATL5_ARATH RING-H2 finger protein ATL5 OS=Ara...359.8     30     40     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006461; P:protein complex assembly; TAS:TAIR.
records
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