Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL008W
Length:
165
Number of sequences:
5887
Description:
YDL008W APC11 SGDID:S000002166, Chr IV from 433497-433994, Genome Release 64-1-1, Verified ORF, "Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151Q9WJB2    3960   RPOA_PRRSR Replicase polyprotein 1ab OS=(PRRS...590.96     33.5     31     42GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
152Q9YN02    3961   RPOA_PRRS1 Replicase polyprotein 1ab OS=(PRRS...590.96     33.5     31     42GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
153Q91XF4    347   RN167_MOUSE E3 ubiquitin-protein ligase RNF16...610.98     33.1     31     48GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
154Q9XF63    324   ATL3_ARATH RING-H2 finger protein ATL3 OS=Ara...461     33.1     39     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
155P86448    445   TR43B_MOUSE Tripartite motif-containing prote...541.1     33.1     33     50GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
156Q803C1    485   RNF8_DANRE E3 ubiquitin-protein ligase RNF8 O...511.1     33.1     35     47GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:InterPro.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
157Q9BV68    326   RN126_HUMAN RING finger protein 126 OS=Homo s...331.1     32.7     45     61
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
158Q9SN28    236   ATL7_ARATH RING-H2 finger protein ATL7 OS=Ara...791.1     32.7     29     39GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
159Q7TPV2    1204   DZIP3_MOUSE E3 ubiquitin-protein ligase DZIP3...271.1     33.1     48     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0019902; F:phosphatase binding; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
160O06758    733   FLHA_HELPY Flagellar biosynthesis protein flh...571.1     33.1     25     58GO:0019861; C:flagellum; IEA:InterPro.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0009306; P:protein secretion; IEA:InterPro.
161P30631    161   YOUD_CAEEL Uncharacterized RING finger protei...391.2     32.3     33     54
GO:0008270; F:zinc ion binding; IEA:InterPro.
162A0JN74    468   TRI11_BOVIN E3 ubiquitin-protein ligase TRIM1...941.2     32.7     29     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009615; P:response to virus; IEA:UniProtKB-KW.
163Q9LQM2    332   ATL81_ARATH RING-H2 finger protein ATL81 OS=A...681.2     32.7     28     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
164Q84TF5    174   RHA4A_ARATH RING-H2 zinc finger protein RHA4a...371.2     32.3     38     51
GO:0008270; F:zinc ion binding; IEA:InterPro.
165Q8W4Q5    577   RIN3_ARATH E3 ubiquitin protein ligase RIN3 O...541.3     32.7     33     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; TAS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009626; P:plant-type hypersensitive response; IEA:UniProtKB-KW.::GO:0034052; P:positive regulation of plant-type hypersensitive response; IGI:TAIR.
166Q6GPV5    156   RN181_XENLA E3 ubiquitin-protein ligase RNF18...741.3     32.3     30     45
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
167Q9C7I1    327   ATL34_ARATH RING-H2 finger protein ATL34 OS=A...351.3     32.7     40     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
168Q8BI21    518   RNF38_MOUSE RING finger protein 38 OS=Mus mus...661.4     32.7     27     45
GO:0008270; F:zinc ion binding; IEA:InterPro.
169Q9LRB7    325   EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=...291.4     32.7     45     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IMP:UniProtKB.::GO:0048364; P:root development; IMP:UniProtKB.
170Q9LT17    340   BBR_ARATH E3 ubiquitin ligase BIG BROTHER-rel...541.4     32.7     31     43
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.
171Q3KPU8    241   RN166_XENLA RING finger protein 166 OS=Xenopu...921.4     32.3     28     37GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
172Q9FGI1    1873   LTN1_ARATH E3 ubiquitin-protein ligase lister...271.4     32.7     41     67GO:0005829; C:cytosol; IDA:TAIR.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
173Q9FF61    881   SM3L1_ARATH Putative SWI/SNF-related matrix-a...441.4     32.7     41     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
174Q9SRQ8    356   ATL51_ARATH RING-H2 finger protein ATL51 OS=A...471.4     32.7     34     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0080167; P:response to karrikin; IEP:TAIR.
175Q8SV35    314   Y733_ENCCU Uncharacterized RING finger protei...881.5     32.3     28     45
GO:0008270; F:zinc ion binding; IEA:InterPro.
176Q5RAG4    444   RNFT2_PONAB RING finger and transmembrane dom...621.6     32.7     31     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
177Q8LGA5    368   ATL31_ARATH E3 ubiquitin-protein ligase ATL31...461.6     32.3     35     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043562; P:cellular response to nitrogen levels; IMP:TAIR.::GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0009737; P:response to abscisic acid stimulus; IEP:UniProtKB.::GO:0010200; P:response to chitin; IEP:TAIR.
178Q96MT1    663   RN145_HUMAN RING finger protein 145 OS=Homo s...681.6     32.7     29     37GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
179Q99942    180   RNF5_HUMAN E3 ubiquitin-protein ligase RNF5 O...491.7     32     27     53GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031966; C:mitochondrial membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; TAS:ProtInc.
GO:0071712; P:ER-associated misfolded protein catabolic process; IMP:UniProtKB.::GO:0070936; P:protein K48-linked ubiquitination; IDA:UniProtKB.::GO:0070534; P:protein K63-linked ubiquitination; IDA:UniProtKB.
180O54915    431   NR1I2_MOUSE Nuclear receptor subfamily 1 grou...1431.7     32.3     25     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008144; F:drug binding; ISS:UniProtKB.::GO:0004879; F:ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003707; F:steroid hormone receptor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046618; P:drug export; ISS:UniProtKB.::GO:0042738; P:exogenous drug catabolic process; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006805; P:xenobiotic metabolic process; ISS:UniProtKB.::GO:0042908; P:xenobiotic transport; ISS:UniProtKB.
181P0C035    310   ATL60_ARATH RING-H2 finger protein ATL60 OS=A...481.7     32.3     38     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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