Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL008W
Length:
165
Number of sequences:
5887
Description:
YDL008W APC11 SGDID:S000002166, Chr IV from 433497-433994, Genome Release 64-1-1, Verified ORF, "Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; contains a RING-H2 domain that is required for activity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q570X5    261   ATL58_ARATH RING-H2 finger protein ATL58 OS=A...950.55     33.5     28     37GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
122Q1XHU0    518   TRI39_PANTR Tripartite motif-containing prote...330.57     33.9     45     55GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
123Q9HCM9    518   TRI39_HUMAN Tripartite motif-containing prote...330.57     33.9     45     55GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
124Q9JIT1    368   RNF32_MOUSE RING finger protein 32 OS=Mus mus...450.57     33.9     38     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
125O00237    685   RN103_HUMAN E3 ubiquitin-protein ligase RNF10...560.62     33.9     32     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007417; P:central nervous system development; TAS:ProtInc.::GO:0030433; P:ER-associated protein catabolic process; IDA:UniProtKB.
126Q8GT75    236   NIP1_ARATH NEP1-interacting protein 1 OS=Arab...280.64     33.5     54     57GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
127Q91YL2    313   RN126_MOUSE RING finger protein 126 OS=Mus mu...330.67     33.5     45     61
GO:0008270; F:zinc ion binding; IEA:InterPro.
128Q8L9T5    304   ATL2_ARATH RING-H2 finger protein ATL2 OS=Ara...1010.69     33.5     25     38GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006952; P:defense response; IDA:TAIR.::GO:0010200; P:response to chitin; IEP:TAIR.
129P87119    309   MU145_SCHPO RING finger protein mug145 OS=Sch...640.7     33.5     33     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
130A8Y4B2    622   HRD1_CAEBR E3 ubiquitin-protein ligase hrd-1 ...670.71     33.5     28     36GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
131Q9P7E1    583   YOF7_SCHPO Uncharacterized RING finger protei...370.73     33.5     43     59GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
132Q8LF65    235   ATL17_ARATH RING-H2 finger protein ATL17 OS=A...480.73     33.1     33     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0010200; P:response to chitin; IEP:TAIR.
133Q5XIL0    349   RN167_RAT E3 ubiquitin-protein ligase RNF167 ...610.78     33.5     33     48GO:0012505; C:endomembrane system; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
134O70277    744   TRIM3_RAT Tripartite motif-containing protein...740.8     33.5     28     43GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:RGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
135Q9R1R2    744   TRIM3_MOUSE Tripartite motif-containing prote...740.8     33.5     28     43GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
136Q9FLC6    176   ATL73_ARATH RING-H2 finger protein ATL73 OS=A...340.8     33.1     44     59GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
137Q0II22    313   RN126_BOVIN RING finger protein 126 OS=Bos ta...330.81     33.1     45     61
GO:0008270; F:zinc ion binding; IEA:InterPro.
138Q9SUS4    159   RHA1A_ARATH RING-H2 zinc finger protein RHA1a...970.81     32.7     27     40
GO:0008270; F:zinc ion binding; IEA:InterPro.
139Q9FKX5    221   NIPL1_ARATH NEP1-interacting protein-like 1 O...280.83     33.1     50     61GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0010200; P:response to chitin; IEP:TAIR.
140Q9FIR0    289   ATL30_ARATH RING-H2 finger protein ATL30 OS=A...340.85     33.1     38     59GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
141Q6NZ21    419   RNFT1_DANRE RING finger and transmembrane dom...710.85     33.5     30     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
142D2GXS7    744   TRIM2_AILME Tripartite motif-containing prote...700.88     33.5     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
143Q8VYC8    578   RIN2_ARATH E3 ubiquitin protein ligase RIN2 O...550.88     33.5     33     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009626; P:plant-type hypersensitive response; IEA:UniProtKB-KW.::GO:0034052; P:positive regulation of plant-type hypersensitive response; IGI:TAIR.
144F7H9X2    744   TRIM2_CALJA Tripartite motif-containing prote...700.89     33.5     29     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043526; P:neuroprotection; ISS:UniProtKB.
145Q5EAE9    407   ATL43_ARATH RING-H2 finger protein ATL43 OS=A...680.91     33.1     28     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
146Q8GW38    369   ATL47_ARATH RING-H2 finger protein ATL47 OS=A...440.92     33.1     39     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
147Q9CQ29    239   RN151_MOUSE RING finger protein 151 OS=Mus mu...600.92     33.1     33     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
148Q9SN27    225   ATL59_ARATH E3 ubiquitin-protein ligase ATL59...790.92     33.1     30     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
149Q4KLN8    487   RNF8_RAT E3 ubiquitin-protein ligase RNF8 OS=...710.92     33.1     28     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0030496; C:midbody; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
150Q3UF64    445   RNFT2_MOUSE RING finger and transmembrane dom...620.92     33.1     31     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
151Q9WJB2    3960   RPOA_PRRSR Replicase polyprotein 1ab OS=(PRRS...590.96     33.5     31     42GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0044220; C:host cell perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030683; P:evasion by virus of host immune response; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.::GO:0019079; P:viral genome replication; IEA:InterPro.::GO:0019082; P:viral protein processing; IEA:InterPro.
records
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