Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL007W
Length:
437
Number of sequences:
5887
Description:
YDL007W RPT2 SGDID:S000002165, Chr IV from 438047-439360, Genome Release 64-1-1, Verified ORF, "One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q5H432    850   LON_XANOR Lon protease OS=Xanthomonas oryzae ...1230.56     36.6     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
842P60373    430   RFCL_NANEQ Replication factor C large subunit...820.56     36.2     29     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
843Q2IIK1    843   LON_ANADE Lon protease OS=Anaeromyxobacter de...1720.56     36.2     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
844P0C113    812   LON_BRUAB Lon protease OS=Brucella abortus bi...1030.56     36.2     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
845Q2YPX3    812   LON_BRUA2 Lon protease OS=Brucella abortus (s...1030.56     36.2     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
846Q5R7N3    633   CLPX_PONAB ATP-dependent Clp protease ATP-bin...1010.57     36.2     33     51GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
847Q73M37    415   CLPX_TREDE ATP-dependent Clp protease ATP-bin...780.58     36.2     37     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
848Q8CS91    334   RUVB_STAES Holliday junction ATP-dependent DN...960.59     35.8     29     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
849Q5HNR0    334   RUVB_STAEQ Holliday junction ATP-dependent DN...960.59     35.8     29     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
850Q3SX23    852   LONP2_BOVIN Lon protease homolog 2, peroxisom...1660.6     36.2     26     39GO:0009295; C:nucleoid; ISS:RefGenome.::GO:0005782; C:peroxisomal matrix; ISS:RefGenome.
GO:0005524; F:ATP binding; ISS:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; ISS:RefGenome.::GO:0043565; F:sequence-specific DNA binding; ISS:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; ISS:RefGenome.
GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; ISS:RefGenome.
851P36776    959   LONM_HUMAN Lon protease homolog, mitochondria...1870.6     36.2     26     39GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0043531; F:ADP binding; IDA:UniProtKB.::GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0004176; F:ATP-dependent peptidase activity; IDA:UniProtKB.::GO:0070182; F:DNA polymerase binding; IPI:UniProtKB.::GO:0051880; F:G-quadruplex DNA binding; IDA:UniProtKB.::GO:0070362; F:mitochondrial heavy strand promoter anti-sense binding; IDA:UniProtKB.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0034599; P:cellular response to oxidative stress; IDA:UniProtKB.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0032042; P:mitochondrial DNA metabolic process; NAS:UniProtKB.::GO:0070407; P:oxidation-dependent protein catabolic process; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.::GO:0001666; P:response to hypoxia; IEP:UniProtKB.
852O31147    779   LON_MYCSM Lon protease OS=Mycobacterium smegm...810.6     36.2     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
853B3QPN4    439   CLPX_CHLP8 ATP-dependent Clp protease ATP-bin...1030.61     36.2     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
854A4S6Y4    936   LONM_OSTLU Lon protease homolog, mitochondria...1100.61     36.2     30     45GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
855C0R250    346   RUVB_BRAHW Holliday junction ATP-dependent DN...710.62     35.8     32     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
856Q8G0I7    812   LON_BRUSU Lon protease OS=Brucella suis biova...1030.62     36.2     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
857Q600B5    870   LON_MYCH2 Lon protease OS=Mycoplasma hyopneum...780.62     36.2     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
858O51557    430   CLPX_BORBU ATP-dependent Clp protease ATP-bin...790.63     35.8     33     53GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
859A1W5B7    421   CLPX_ACISJ ATP-dependent Clp protease ATP-bin...780.63     35.8     32     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
860B9MG15    421   CLPX_ACIET ATP-dependent Clp protease ATP-bin...780.63     35.8     32     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
861Q68WZ0    342   RUVB_RICTY Holliday junction ATP-dependent DN...700.63     35.8     31     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
862A7HK39    810   LON_FERNB Lon protease OS=Fervidobacterium no...790.63     36.2     30     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
863A4SDM4    438   CLPX_PROVI ATP-dependent Clp protease ATP-bin...1030.63     35.8     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
864Q8YHC6    812   LON_BRUME Lon protease OS=Brucella melitensis...1030.64     36.2     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
865O76031    633   CLPX_HUMAN ATP-dependent Clp protease ATP-bin...1010.65     36.2     33     51GO:0009841; C:mitochondrial endopeptidase Clp complex; IDA:UniProtKB.::GO:0005743; C:mitochondrial inner membrane; ISS:UniProtKB.::GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016504; F:peptidase activator activity; IDA:UniProtKB.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0051603; P:proteolysis involved in cellular protein catabolic process; IDA:UniProtKB.
866Q18GQ9    516   RFCL_HALWD Replication factor C large subunit...1000.65     36.2     28     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
867B5RPV8    429   CLPX_BORRA ATP-dependent Clp protease ATP-bin...880.66     35.8     34     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
868B5RMG2    429   CLPX_BORDL ATP-dependent Clp protease ATP-bin...880.66     35.8     34     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
869Q00WL5    863   LONM_OSTTA Lon protease homolog, mitochondria...870.67     36.2     32     47GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
870Q7X9A0    476   RCA1_LARTR Ribulose bisphosphate carboxylase/...1510.68     35.8     25     46GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
871B1WUD2    435   CLPX_CYAA5 ATP-dependent Clp protease ATP-bin...780.7     35.8     33     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
records
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