Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YDL007W
Length:
437
Number of sequences:
5887
Description:
YDL007W RPT2 SGDID:S000002165, Chr IV from 438047-439360, Genome Release 64-1-1, Verified ORF, "One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; required for normal peptide hydrolysis by the core 20S particle"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q4A7W4    318   RUVB_MYCH7 Holliday junction ATP-dependent DN...730.014     40.8     38     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
662Q600N3    318   RUVB_MYCH2 Holliday junction ATP-dependent DN...730.014     40.8     38     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
663P36773    817   LON1_MYXXA Lon protease 1 OS=Myxococcus xanth...900.016     41.2     36     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
664Q01587    413   RCA_CUCSA Ribulose bisphosphate carboxylase/o...2350.017     40.8     24     42GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
665A8XFM8    960   LONM_CAEBR Lon protease homolog, mitochondria...1150.018     41.2     30     48GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
666A8Y3E2    773   LONP2_CAEBR Lon protease homolog 2, peroxisom...1660.018     41.2     31     42GO:0005782; C:peroxisomal matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
667O64301    320   DPA44_BPR69 DNA polymerase accessory protein ...1050.02     40.4     30     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
668Q550C8    836   LONM2_DICDI Lon protease homolog, mitochondri...1170.022     40.8     32     50GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IBA:RefGenome.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0007005; P:mitochondrion organization; IBA:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0001666; P:response to hypoxia; IBA:RefGenome.
669A1RWU6    413   RFCL_THEPD Replication factor C large subunit...1330.023     40.4     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
670A3M072    1086   LONM_PICST Lon protease homolog, mitochondria...1410.024     40.8     30     46GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
671B3QWK0    431   CLPX_CHLT3 ATP-dependent Clp protease ATP-bin...1030.024     40.4     31     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
672Q8WHW9    2313   YCF2_PSINU Protein ycf2 OS=Psilotum nudum (Wh...1510.026     40.8     25     47GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
673Q5T2N8    411   ATD3C_HUMAN ATPase family AAA domain-containi...770.032     40     32     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
674Q85WV5    2062   YCF2_PINKO Protein ycf2 OS=Pinus koraiensis (...1520.034     40.4     24     45GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
675Q869L3    5900   MDN1_DICDI Midasin OS=Dictyostelium discoideu...650.035     40.4     34     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; IEA:InterPro.
GO:0006461; P:protein complex assembly; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
676Q026Q2    806   LON_SOLUE Lon protease OS=Solibacter usitatus...1400.036     40     29     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
677Q9XW87    773   LONP2_CAEEL Lon protease homolog 2, peroxisom...1660.036     40     31     42GO:0009295; C:nucleoid; IBA:RefGenome.::GO:0005782; C:peroxisomal matrix; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IBA:RefGenome.::GO:0043565; F:sequence-specific DNA binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IBA:RefGenome.
GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IBA:RefGenome.::GO:0016485; P:protein processing; IBA:RefGenome.
678A2RAF6    929   LONP2_ASPNC Lon protease homolog 2, peroxisom...1810.037     40     29     41GO:0005782; C:peroxisomal matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
679Q5GS84    426   CLPX_WOLTR ATP-dependent Clp protease ATP-bin...1030.038     40     34     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
680Q6KI22    833   LON_MYCMO Lon protease OS=Mycoplasma mobile (...780.038     40     37     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
681B5RL78    816   LON_BORDL Lon protease OS=Borrelia duttonii (...1480.039     40     30     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
682O64981    441   RCA_PHAVU Ribulose bisphosphate carboxylase/o...1510.041     39.7     25     46GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
683Q9M9L8    924   LONM3_ARATH Lon protease homolog 3, mitochond...860.042     40     33     42GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
684Q8TZC5    510   RFCL_METKA Replication factor C large subunit...1220.044     39.7     25     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
685P36775    1133   LONM_YEAST Lon protease homolog, mitochondria...2370.045     40     24     41GO:0042645; C:mitochondrial nucleoid; IBA:RefGenome.
GO:0005524; F:ATP binding; IBA:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; IMP:SGD.::GO:0070361; F:mitochondrial light strand promoter anti-sense binding; IBA:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IBA:RefGenome.::GO:0003727; F:single-stranded RNA binding; IBA:RefGenome.
GO:0034599; P:cellular response to oxidative stress; IBA:RefGenome.::GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; IMP:SGD.::GO:0007005; P:mitochondrion organization; IBA:RefGenome.::GO:0070407; P:oxidation-dependent protein catabolic process; IBA:RefGenome.::GO:0051260; P:protein homooligomerization; IBA:RefGenome.::GO:0001666; P:response to hypoxia; IBA:RefGenome.
686Q98PR1    315   RUVB_MYCPU Holliday junction ATP-dependent DN...750.045     39.3     36     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
687Q7MX10    411   CLPX_PORGI ATP-dependent Clp protease ATP-bin...780.045     39.7     35     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
688B2RL24    411   CLPX_PORG3 ATP-dependent Clp protease ATP-bin...780.045     39.7     35     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
689A5FG89    817   LON_FLAJ1 Lon protease OS=(Cytophaga johnsona...1390.047     39.7     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
690Q4JAB1    437   RFCL_SULAC Replication factor C large subunit...780.051     39.3     32     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
691O13984    504   WRIP1_SCHPO ATPase WRNIP1 homolog C26H5.02c O...810.055     39.3     30     51GO:0005634; C:nucleus; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0043142; F:single-stranded DNA-dependent ATPase activity; ISS:PomBase.
GO:0033567; P:DNA replication, Okazaki fragment processing; ISS:PomBase.::GO:0000731; P:DNA synthesis involved in DNA repair; ISS:PomBase.
records
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