rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | P17741 | 210 | HMGB2_PIG High mobility group protein B2 OS=S... | 74 | 4.5 | 31.2 | 20 | 49 | GO:0000793; C:condensed chromosome; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0008301; F:DNA binding, bending; IDA:UniProtKB. | | | | | | | | | | GO:0006288; P:base-excision repair, DNA ligation; ISS:UniProtKB.::GO:0006265; P:DNA topological change; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 62 | Q24537 | 393 | HMG2_DROME High mobility group protein DSP1 O... | 39 | 1.7 | 33.1 | 31 | 72 | GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:FlyBase. | | | | | | | | | | GO:0008301; F:DNA binding, bending; IDA:FlyBase.::GO:0003697; F:single-stranded DNA binding; NAS:UniProtKB.::GO:0017025; F:TBP-class protein binding; IPI:FlyBase. | | | | | | | | | | GO:0006338; P:chromatin remodeling; IMP:FlyBase.::GO:0006268; P:DNA unwinding involved in replication; NAS:UniProtKB.::GO:0035218; P:leg disc development; IMP:FlyBase.::GO:0008348; P:negative regulation of antimicrobial humoral response; IMP:FlyBase.::GO:0017055; P:negative regulation of RNA polymerase II transcriptional preinitiation complex assembly; IDA:FlyBase.::GO:0043388; P:positive regulation of DNA binding; IDA:FlyBase.::GO:0007379; P:segment specification; IMP:FlyBase. | 63 | Q9W602 | 693 | SSRP1_XENLA FACT complex subunit SSRP1 OS=Xen... | 86 | 0.0004 | 44.3 | 29 | 56 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 64 | Q4H2R2 | 704 | SSRP1_CIOIN FACT complex subunit SSRP1 OS=Cio... | 77 | 0.0006 | 43.5 | 29 | 58 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 65 | Q04678 | 706 | SSRP1_CHICK FACT complex subunit SSRP1 OS=Gal... | 76 | 0.0007 | 43.5 | 28 | 59 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 66 | P27347 | 157 | MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea ... | 76 | 0.0007 | 42 | 32 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 67 | Q9LG02 | 337 | HMG11_ARATH Putative high mobility group B pr... | 103 | 0.0007 | 43.1 | 29 | 47 | GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 68 | P40644 | 200 | HMGH_STRPU High mobility group protein 1 homo... | 75 | 0.0008 | 42.7 | 31 | 56 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 69 | P40621 | 161 | HMGL_WHEAT HMG1/2-like protein OS=Triticum ae... | 75 | 0.0008 | 42 | 31 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 70 | Q91ZW1 | 244 | TFAM_RAT Transcription factor A, mitochondria... | 75 | 0.001 | 42.4 | 27 | 56 | GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:RGD. | | | | | | | | | | GO:0006264; P:mitochondrial DNA replication; TAS:RGD.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB. | 71 | Q4H0T5 | 246 | TFAM_TRACR Transcription factor A, mitochondr... | 99 | 0.001 | 42.4 | 28 | 57 | GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB. | 72 | Q04931 | 709 | SSRP1_RAT FACT complex subunit SSRP1 OS=Rattu... | 72 | 0.002 | 42.4 | 28 | 58 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; NAS:RGD. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 73 | Q9N1Q5 | 242 | SP100_HYLLA Nuclear autoantigen Sp-100 OS=Hyl... | 54 | 0.002 | 41.6 | 39 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 74 | Q0II87 | 246 | TFAM_BOVIN Transcription factor A, mitochondr... | 108 | 0.002 | 41.6 | 26 | 53 | GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB. | 75 | Q5D144 | 246 | TFAM_PIG Transcription factor A, mitochondria... | 108 | 0.002 | 41.6 | 25 | 53 | GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; ISS:UniProtKB. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006391; P:transcription initiation from mitochondrial promoter; ISS:UniProtKB. | 76 | Q42344 | 138 | HMGB4_ARATH High mobility group B protein 4 O... | 87 | 0.002 | 40 | 25 | 45 | GO:0000785; C:chromatin; TAS:TAIR.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003682; F:chromatin binding; TAS:TAIR.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0030527; F:structural constituent of chromatin; TAS:TAIR. | | | | | | | | | | GO:0006333; P:chromatin assembly or disassembly; TAS:TAIR. | 77 | Q9DC33 | 346 | HM20A_MOUSE High mobility group protein 20A O... | 85 | 0.003 | 41.2 | 31 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 78 | Q9NP66 | 347 | HM20A_HUMAN High mobility group protein 20A O... | 85 | 0.004 | 40.8 | 31 | 48 | GO:0005634; C:nucleus; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 79 | P26586 | 271 | HMGL_TRYBR High mobility group protein homolo... | 66 | 0.004 | 40.8 | 26 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 80 | Q5ZKF4 | 348 | HM20A_CHICK High mobility group protein 20A O... | 85 | 0.005 | 40.4 | 29 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 81 | Q8LDF9 | 241 | HMGB7_ARATH High mobility group B protein 7 O... | 81 | 0.006 | 40 | 32 | 48 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:TAIR. | | | | | | | | | | | 82 | O64702 | 151 | HMG14_ARATH High mobility group B protein 14 ... | 87 | 0.006 | 39.3 | 23 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 83 | Q9N1Q7 | 215 | SP100_PANTR Nuclear autoantigen Sp-100 OS=Pan... | 54 | 0.009 | 39.7 | 37 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 84 | Q9N1Q6 | 225 | SP100_GORGO Nuclear autoantigen Sp-100 OS=Gor... | 54 | 0.01 | 39.3 | 37 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 85 | Q32L34 | 194 | HMGB4_BOVIN High mobility group protein B4 OS... | 76 | 0.01 | 39.3 | 28 | 58 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 86 | Q09390 | 235 | HMG12_CAEEL High mobility group protein 1.2 O... | 65 | 4.6 | 31.2 | 28 | 57 | GO:0005634; C:nucleus; IDA:WormBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.::GO:0016055; P:Wnt receptor signaling pathway; IGI:WormBase. | 87 | Q55C24 | 141 | NHP6_DICDI Non-histone chromosomal protein 6 ... | 76 | 0.011 | 38.5 | 26 | 61 | GO:0000790; C:nuclear chromatin; ISS:dictyBase. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:dictyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006325; P:chromatin organization; ISS:dictyBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 88 | Q8WW32 | 186 | HMGB4_HUMAN High mobility group protein B4 OS... | 76 | 0.017 | 38.5 | 26 | 57 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 89 | P23497 | 879 | SP100_HUMAN Nuclear autoantigen Sp-100 OS=Hom... | 54 | 0.017 | 39.3 | 37 | 56 | GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0034399; C:nuclear periphery; IDA:BHF-UCL.::GO:0005730; C:nucleolus; IDA:BHF-UCL.::GO:0016605; C:PML body; IDA:BHF-UCL. | | | | | | | | | | GO:0070087; F:chromo shadow domain binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0019900; F:kinase binding; IPI:BHF-UCL.::GO:0042803; F:protein homodimerization activity; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IDA:BHF-UCL.::GO:0003714; F:transcription corepressor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:BHF-UCL. | | | | | | | | | | GO:0006978; P:DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator; IDA:BHF-UCL.::GO:0060333; P:interferon-gamma-mediated signaling pathway; IC:BHF-UCL.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051271; P:negative regulation of cellular component movement; IMP:BHF-UCL.::GO:0043392; P:negative regulation of DNA binding; IDA:BHF-UCL.::GO:0043433; P:negative regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:BHF-UCL.::GO:0032897; P:negative regulation of viral transcription; IDA:BHF-UCL.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:BHF-UCL.::GO:0034097; P:response to cytokine stimulus; IDA:BHF-UCL.::GO:0032526; P:response to retinoic acid; IDA:BHF-UCL.::GO:0034340; P:response to type I interferon; IDA:BHF-UCL.::GO:0048384; P:retinoic acid receptor signaling pathway; IC:BHF-UCL.::GO:0060337; P:type I interferon-mediated signaling pathway; IC:BHF-UCL. | 90 | Q00059 | 246 | TFAM_HUMAN Transcription factor A, mitochondr... | 75 | 0.02 | 38.5 | 27 | 53 | GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0070363; F:mitochondrial light strand promoter sense binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0006261; P:DNA-dependent DNA replication; TAS:ProtInc.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; TAS:ProtInc.::GO:0006391; P:transcription initiation from mitochondrial promoter; IDA:UniProtKB. | 91 | Q6DIJ5 | 345 | HM20A_XENTR High mobility group protein 20A O... | 92 | 0.021 | 38.9 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |