Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q03014    270   HHEX_HUMAN Hematopoietically-expressed homeob...404     30.4     33     63GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0032993; C:protein-DNA complex; IDA:BHF-UCL.
GO:0008301; F:DNA binding, bending; IDA:BHF-UCL.::GO:0008190; F:eukaryotic initiation factor 4E binding; IDA:BHF-UCL.::GO:0042803; F:protein homodimerization activity; IPI:BHF-UCL.::GO:0070491; F:repressing transcription factor binding; IDA:BHF-UCL.::GO:0043565; F:sequence-specific DNA binding; IDA:BHF-UCL.::GO:0017025; F:TBP-class protein binding; TAS:BHF-UCL.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0030183; P:B cell differentiation; ISS:BHF-UCL.::GO:0007049; P:cell cycle; IDA:BHF-UCL.::GO:0071103; P:DNA conformation change; IDA:BHF-UCL.::GO:0016525; P:negative regulation of angiogenesis; ISS:BHF-UCL.::GO:0010944; P:negative regulation of transcription by competitive promoter binding; TAS:BHF-UCL.::GO:0010621; P:negative regulation of transcription by transcription factor localization; IC:BHF-UCL.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0030948; P:negative regulation of vascular endothelial growth factor receptor signaling pathway; ISS:BHF-UCL.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0034504; P:protein localization to nucleus; IDA:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
842P09634    105   HXA7_RAT Homeobox protein Hox-A7 OS=Rattus no...424     29.6     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
843Q63087    326   ALX1_RAT ALX homeobox protein 1 OS=Rattus nor...404.1     30.4     33     65GO:0005634; C:nucleus; IDA:RGD.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:RGD.
GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0001501; P:skeletal system development; TAS:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
844Q62066    280   PHX2A_MOUSE Paired mesoderm homeobox protein ...404.1     30.4     38     60
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0021703; P:locus ceruleus development; IMP:MGI.::GO:0030901; P:midbrain development; IMP:MGI.::GO:0003357; P:noradrenergic neuron differentiation; IMP:MGI.::GO:0048486; P:parasympathetic nervous system development; IMP:MGI.::GO:0043576; P:regulation of respiratory gaseous exchange; IMP:MGI.::GO:0021523; P:somatic motor neuron differentiation; IMP:MGI.::GO:0048485; P:sympathetic nervous system development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
845Q5TM84    305   NANOG_MACFA Homeobox protein NANOG OS=Macaca ...384.1     30.4     34     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
846Q15699    326   ALX1_HUMAN ALX homeobox protein 1 OS=Homo sap...404.2     30.4     33     65GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0007420; P:brain development; TAS:ProtInc.::GO:0001502; P:cartilage condensation; TAS:ProtInc.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
847Q1KKR7    301   HXD9B_TAKRU Homeobox protein Hox-D9b OS=Takif...424.2     30.4     38     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
848P61376    402   LHX5_RAT LIM/homeobox protein Lhx5 OS=Rattus ...754.2     30.4     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
849P61375    402   LHX5_MOUSE LIM/homeobox protein Lhx5 OS=Mus m...754.2     30.4     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0021846; P:cell proliferation in forebrain; IMP:MGI.::GO:0021702; P:cerebellar Purkinje cell differentiation; IGI:MGI.::GO:0021937; P:cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation; IGI:MGI.::GO:0021879; P:forebrain neuron differentiation; IMP:MGI.::GO:0021766; P:hippocampus development; IMP:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IGI:UniProtKB.::GO:0021527; P:spinal cord association neuron differentiation; IGI:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
850Q9YGT0    283   HXCCB_DANRE Homeobox protein Hox-C12b OS=Dani...424.2     30.4     31     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
851O93307    246   SIX6_CHICK Homeobox protein SIX6 OS=Gallus ga...394.2     30.4     36     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
852P18867    114   HXD3_RAT Homeobox protein Hox-D3 OS=Rattus no...604.3     29.6     27     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
853Q14863    301   PO6F1_HUMAN POU domain, class 6, transcriptio...514.3     30.4     35     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0007420; P:brain development; TAS:ProtInc.::GO:0007507; P:heart development; TAS:ProtInc.::GO:0007517; P:muscle organ development; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
854Q91998    341   BRN3_CHICK Brain-specific homeobox/POU domain...1064.3     30.4     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
855P09023    224   HXB6_MOUSE Homeobox protein Hox-B6 OS=Mus mus...424.3     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048706; P:embryonic skeletal system development; IMP:MGI.::GO:0034101; P:erythrocyte homeostasis; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
856Q9PVX0    317   RX2_CHICK Retinal homeobox protein Rx2 OS=Gal...404.4     30.4     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
857Q91574    335   ALX1_XENLA ALX homeobox protein 1 OS=Xenopus ...404.4     30.4     33     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
858P41817    306   CUP9_YEAST Homeobox protein CUP9 OS=Saccharom...274.4     30.4     48     67GO:0005634; C:nucleus; IC:SGD.
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:SGD.::GO:0001103; F:RNA polymerase II repressing transcription factor binding; IPI:SGD.::GO:0001133; F:sequence-specific transcription regulatory region DNA binding RNA polymerase II transcription factor recruiting transcription factor activity; IC:SGD.
GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.
859Q9SJ56    680   BLH1_ARATH BEL1-like homeodomain protein 1 OS...434.4     30.4     42     60GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.::GO:0042803; F:protein homodimerization activity; IPI:TAIR.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0010197; P:polar nucleus fusion; IMP:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IEP:TAIR.::GO:0010201; P:response to continuous far red light stimulus by the high-irradiance response system; IMP:TAIR.::GO:0009610; P:response to symbiotic fungus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
860P39021    298   MEOX2_XENLA Homeobox protein MOX-2 OS=Xenopus...424.4     30.4     38     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
861P31267    233   HXA6_HUMAN Homeobox protein Hox-A6 OS=Homo sa...424.4     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
862Q1KL13    255   HXA4A_TAKRU Homeobox protein Hox-A4a OS=Takif...424.4     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
863P17509    224   HXB6_HUMAN Homeobox protein Hox-B6 OS=Homo sa...424.5     30     33     60GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0008595; P:anterior/posterior axis specification, embryo; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
864P09024    217   HXB7_MOUSE Homeobox protein Hox-B7 OS=Mus mus...424.6     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IMP:MGI.::GO:0030099; P:myeloid cell differentiation; IMP:MGI.::GO:0090190; P:positive regulation of branching involved in ureteric bud morphogenesis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
865Q9IAV3    228   HHEX_DANRE Hematopoietically-expressed homeob...404.6     30     33     63GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; ISS:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0048565; P:digestive tract development; IMP:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; IMP:UniProtKB.::GO:0035162; P:embryonic hemopoiesis; IMP:UniProtKB.::GO:0007507; P:heart development; IMP:ZFIN.::GO:0001889; P:liver development; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045603; P:positive regulation of endothelial cell differentiation; IMP:ZFIN.::GO:0046620; P:regulation of organ growth; IMP:ZFIN.::GO:0030878; P:thyroid gland development; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
866Q9PWD2    248   HXA4_MORSA Homeobox protein Hox-A4 OS=Morone ...424.6     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
867Q9QZ28    246   SIX6_MOUSE Homeobox protein SIX6 OS=Mus muscu...414.8     30     34     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
868Q61329    3726   ZFHX3_MOUSE Zinc finger homeobox protein 3 OS...594.8     30.4     24     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007517; P:muscle organ development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
869P09085    427   CAD_DROME Homeotic protein caudal OS=Drosophi...454.8     30.4     27     58GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase.
GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:FlyBase.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:FlyBase.
GO:0007487; P:analia development; TAS:FlyBase.::GO:0009948; P:anterior/posterior axis specification; TAS:FlyBase.::GO:0007350; P:blastoderm segmentation; IMP:UniProtKB.::GO:0035224; P:genital disc anterior/posterior pattern formation; IEP:FlyBase.::GO:0007377; P:germ-band extension; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; TAS:FlyBase.::GO:0008284; P:positive regulation of cell proliferation; IDA:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
870Q26430    97   ABDA_MANSE Homeobox protein abdominal-A homol...554.9     29.3     27     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
871Q9Z0J4    1429   NOS1_MOUSE Nitric oxide synthase, brain OS=Mu...484.9     30.4     33     52GO:0005856; C:cytoskeleton; IDA:BHF-UCL.::GO:0043197; C:dendritic spine; IEA:UniProtKB-SubCell.::GO:0042383; C:sarcolemma; IDA:BHF-UCL.::GO:0045202; C:synapse; IDA:MGI.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.::GO:0010181; F:FMN binding; IEA:InterPro.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0050661; F:NADP binding; IEA:InterPro.::GO:0004517; F:nitric-oxide synthase activity; IDA:BHF-UCL.
GO:0071363; P:cellular response to growth factor stimulus; IMP:BHF-UCL.::GO:0042738; P:exogenous drug catabolic process; IMP:MGI.::GO:0051926; P:negative regulation of calcium ion transport; IMP:MGI.::GO:0051346; P:negative regulation of hydrolase activity; IMP:MGI.::GO:0043267; P:negative regulation of potassium ion transport; IMP:MGI.::GO:0051612; P:negative regulation of serotonin uptake; IDA:UniProtKB.::GO:0006809; P:nitric oxide biosynthetic process; IDA:BHF-UCL.::GO:0018119; P:peptidyl-cysteine S-nitrosylation; IDA:MGI.::GO:0035066; P:positive regulation of histone acetylation; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0002028; P:regulation of sodium ion transport; IMP:MGI.::GO:0006941; P:striated muscle contraction; IMP:MGI.
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