Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811B0SQM8    79   CSRA_LEPBP Carbon storage regulator homolog O...413.5     29.3     32     59
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006109; P:regulation of carbohydrate metabolic process; IEA:InterPro.
812B0SGR0    79   CSRA_LEPBA Carbon storage regulator homolog O...413.5     29.3     32     59
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006109; P:regulation of carbohydrate metabolic process; IEA:InterPro.
813Q62782    281   PHX2A_RAT Paired mesoderm homeobox protein 2A...403.5     30.4     38     60
GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.
814O14813    284   PHX2A_HUMAN Paired mesoderm homeobox protein ...403.5     30.4     38     60GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:ProtInc.
GO:0003357; P:noradrenergic neuron differentiation; NAS:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
815Q9JLT7    342   RX_RAT Retinal homeobox protein Rx OS=Rattus ...403.5     30.4     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
816Q9KQ63    666   FLID_VIBCH Flagellar hook-associated protein ...773.6     30.8     23     55GO:0009288; C:bacterial-type flagellum; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0006928; P:cellular component movement; IEA:InterPro.::GO:0009296; P:flagellum assembly; IEA:InterPro.
817Q9FN29    156   ATB52_ARATH Homeobox-leucine zipper protein A...423.6     30.4     38     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009646; P:response to absence of light; IEP:TAIR.::GO:0009637; P:response to blue light; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
818Q9Y2V3    346   RX_HUMAN Retinal homeobox protein Rx OS=Homo ...403.6     30.4     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; TAS:ProtInc.
819P49639    335   HXA1_HUMAN Homeobox protein Hox-A1 OS=Homo sa...423.6     30.4     33     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0021599; P:abducens nerve formation; IMP:DFLAT.::GO:0048844; P:artery morphogenesis; IMP:DFLAT.::GO:0090103; P:cochlea morphogenesis; IMP:DFLAT.::GO:0050890; P:cognition; IDA:DFLAT.::GO:0048702; P:embryonic neurocranium morphogenesis; IMP:DFLAT.::GO:0050905; P:neuromuscular process; IDA:DFLAT.::GO:0007634; P:optokinetic behavior; IDA:DFLAT.::GO:0042473; P:outer ear morphogenesis; IDA:DFLAT.::GO:0050795; P:regulation of behavior; IDA:DFLAT.::GO:0060876; P:semicircular canal formation; IMP:DFLAT.::GO:0007605; P:sensory perception of sound; IDA:DFLAT.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
820B0W1V2    216   ABDA_CULQU Homeobox protein abdominal-A homol...423.6     30.4     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0009952; P:anterior/posterior pattern specification; ISS:UniProtKB.
821A6NLW8    204   DUXA_HUMAN Double homeobox protein A OS=Homo ...253.6     30.4     44     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
822P56224    438   P3F3A_DANRE POU domain, class 3, transcriptio...553.6     30.4     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
823A6NNA5    263   DRGX_HUMAN Dorsal root ganglia homeobox prote...403.6     30.4     38     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
824Q14549    363   GBX1_HUMAN Homeobox protein GBX-1 OS=Homo sap...423.7     30.4     33     64GO:0000228; C:nuclear chromosome; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
825Q9PWM5    227   HXC6B_DANRE Homeobox protein Hox-C6b OS=Danio...423.7     30.4     31     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
826Q8BYH0    263   DRGX_MOUSE Dorsal root ganglia homeobox prote...403.7     30.4     38     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007411; P:axon guidance; IMP:MGI.::GO:0009593; P:detection of chemical stimulus; IMP:MGI.::GO:0016048; P:detection of temperature stimulus; IMP:MGI.::GO:0021516; P:dorsal spinal cord development; IMP:MGI.::GO:0001764; P:neuron migration; IMP:MGI.::GO:0050954; P:sensory perception of mechanical stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0021559; P:trigeminal nerve development; IMP:MGI.
827Q8JJ26    293   SEBOX_DANRE Homeobox protein SEBOX OS=Danio r...1043.8     30.4     25     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007492; P:endoderm development; IDA:ZFIN.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
828P09092    232   HXA6_MOUSE Homeobox protein Hox-A6 OS=Mus mus...423.8     30.4     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
829P43120    271   HHEX_MOUSE Hematopoietically-expressed homeob...403.8     30.4     33     63GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.
GO:0030183; P:B cell differentiation; IMP:BHF-UCL.::GO:0061009; P:common bile duct development; IMP:MGI.::GO:0035050; P:embryonic heart tube development; IMP:MGI.::GO:0048568; P:embryonic organ development; IMP:MGI.::GO:0007492; P:endoderm development; IMP:MGI.::GO:0048853; P:forebrain morphogenesis; IMP:MGI.::GO:0061010; P:gall bladder development; IMP:MGI.::GO:0061011; P:hepatic duct development; IMP:MGI.::GO:0061017; P:hepatoblast differentiation; IMP:MGI.::GO:0070365; P:hepatocyte differentiation; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0022027; P:interkinetic nuclear migration; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0002573; P:myeloid leukocyte differentiation; IMP:MGI.::GO:0016525; P:negative regulation of angiogenesis; IDA:BHF-UCL.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0030948; P:negative regulation of vascular endothelial growth factor receptor signaling pathway; IDA:BHF-UCL.::GO:0031016; P:pancreas development; IMP:MGI.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0060431; P:primary lung bud formation; IMP:MGI.::GO:0090009; P:primitive streak formation; IMP:MGI.::GO:0042127; P:regulation of cell proliferation; IMP:MGI.::GO:0030878; P:thyroid gland development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001570; P:vasculogenesis; IMP:MGI.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
830Q9H9S0    305   NANOG_HUMAN Homeobox protein NANOG OS=Homo sa...383.8     30.4     34     71GO:0005730; C:nucleolus; IDA:BHF-UCL.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:HGNC.
GO:0008283; P:cell proliferation; IMP:HGNC.::GO:0001714; P:endodermal cell fate specification; IDA:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0035019; P:somatic stem cell maintenance; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
831O76762    308   ABDA_ANOGA Homeobox protein abdominal-A homol...423.9     30.4     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0009952; P:anterior/posterior pattern specification; ISS:UniProtKB.
832P09022    331   HXA1_MOUSE Homeobox protein Hox-A1 OS=Mus mus...423.9     30.4     33     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0048646; P:anatomical structure formation involved in morphogenesis; IGI:MGI.::GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0021953; P:central nervous system neuron differentiation; IMP:MGI.::GO:0021612; P:facial nerve structural organization; IGI:MGI.::GO:0021754; P:facial nucleus development; IMP:MGI.::GO:0042472; P:inner ear morphogenesis; IMP:MGI.::GO:0008045; P:motor axon guidance; IGI:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0021569; P:rhombomere 3 development; IMP:MGI.::GO:0021570; P:rhombomere 4 development; IMP:MGI.::GO:0021571; P:rhombomere 5 development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
833P29556    157   ABDA_SCHGR Homeobox protein abdominal-A homol...423.9     30     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
834Q8C8B0    326   ALX1_MOUSE ALX homeobox protein 1 OS=Mus musc...403.9     30.4     33     65GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0009952; P:anterior/posterior pattern specification; IGI:MGI.::GO:0030326; P:embryonic limb morphogenesis; IGI:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IGI:MGI.::GO:0014031; P:mesenchymal cell development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0060021; P:palate development; IGI:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
835Q1KKX0    280   HXB5B_TAKRU Homeobox protein Hox-B5b OS=Takif...694     30.4     23     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
836P18864    219   HXB7_RAT Homeobox protein Hox-B7 OS=Rattus no...424     30.4     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
837Q62798    263   DRGX_RAT Dorsal root ganglia homeobox protein...404     30.4     38     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
838O95475    246   SIX6_HUMAN Homeobox protein SIX6 OS=Homo sapi...394     30.4     36     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0007601; P:visual perception; TAS:ProtInc.
839P31261    90   HXA2_NOTVI Homeobox protein Hox-A2 OS=Notopht...424     29.3     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
840Q9PWL7    279   HXBAA_DANRE Homeobox protein Hox-B10a OS=Dani...614     30.4     28     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
841Q03014    270   HHEX_HUMAN Hematopoietically-expressed homeob...404     30.4     33     63GO:0005737; C:cytoplasm; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:BHF-UCL.::GO:0032993; C:protein-DNA complex; IDA:BHF-UCL.
GO:0008301; F:DNA binding, bending; IDA:BHF-UCL.::GO:0008190; F:eukaryotic initiation factor 4E binding; IDA:BHF-UCL.::GO:0042803; F:protein homodimerization activity; IPI:BHF-UCL.::GO:0070491; F:repressing transcription factor binding; IDA:BHF-UCL.::GO:0043565; F:sequence-specific DNA binding; IDA:BHF-UCL.::GO:0017025; F:TBP-class protein binding; TAS:BHF-UCL.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0030183; P:B cell differentiation; ISS:BHF-UCL.::GO:0007049; P:cell cycle; IDA:BHF-UCL.::GO:0071103; P:DNA conformation change; IDA:BHF-UCL.::GO:0016525; P:negative regulation of angiogenesis; ISS:BHF-UCL.::GO:0010944; P:negative regulation of transcription by competitive promoter binding; TAS:BHF-UCL.::GO:0010621; P:negative regulation of transcription by transcription factor localization; IC:BHF-UCL.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0030948; P:negative regulation of vascular endothelial growth factor receptor signaling pathway; ISS:BHF-UCL.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:0034504; P:protein localization to nucleus; IDA:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
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