Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721P53410    319   ISL2_CHICK Insulin gene enhancer protein ISL-...272.2     31.2     44     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
722Q90423    307   HXB1B_DANRE Homeobox protein Hox-B1b OS=Danio...422.2     31.2     36     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030902; P:hindbrain development; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
723O35750    237   SHOX2_RAT Short stature homeobox protein 2 OS...422.2     31.2     29     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
724O42365    363   HXA2B_DANRE Homeobox protein Hox-A2b OS=Danio...422.2     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
725Q90X89    262   CDX1_XENTR Homeobox protein CDX-1 OS=Xenopus ...422.2     31.2     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:InterPro.
726Q07961    343   ABDA_TRICA Homeobox protein abdominal-A homol...422.3     31.2     33     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
727O73916    272   SIX3_ORYLA Homeobox protein SIX3 OS=Oryzias l...412.3     31.2     34     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
728Q28599    49   HXA5_SHEEP Homeobox protein Hox-A5 OS=Ovis ar...422.3     29.3     31     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
729P31245    372   HXA2_MOUSE Homeobox protein Hox-A2 OS=Mus mus...422.3     31.2     38     57GO:0005634; C:nucleus; IDA:MGI.
GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0035284; P:brain segmentation; IMP:MGI.::GO:0001709; P:cell fate determination; IMP:MGI.::GO:0009953; P:dorsal/ventral pattern formation; IMP:MGI.::GO:0048703; P:embryonic viscerocranium morphogenesis; IMP:MGI.::GO:0042474; P:middle ear morphogenesis; IMP:MGI.::GO:0008045; P:motor axon guidance; IMP:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0002076; P:osteoblast development; IGI:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0021568; P:rhombomere 2 development; IMP:MGI.::GO:0021658; P:rhombomere 3 morphogenesis; IMP:MGI.::GO:0007379; P:segment specification; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
730B0VXK3    375   HXA2_CALJA Homeobox protein Hox-A2 OS=Callith...422.3     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
731Q28598    87   HXA4_SHEEP Homeobox protein Hox-A4 OS=Ovis ar...422.3     30     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
732Q9JKU8    382   LMX1A_MOUSE LIM homeobox transcription factor...632.3     31.2     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007411; P:axon guidance; IMP:MGI.::GO:0021953; P:central nervous system neuron differentiation; IMP:MGI.::GO:0021549; P:cerebellum development; IMP:MGI.::GO:0021542; P:dentate gyrus development; IMP:MGI.::GO:0071542; P:dopaminergic neuron differentiation; IMP:MGI.::GO:0030901; P:midbrain development; IMP:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IMP:MGI.::GO:0001558; P:regulation of cell growth; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
733O95076    343   ALX3_HUMAN Homeobox protein aristaless-like 3...402.3     31.2     33     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
734O70477    436   PKNX1_MOUSE Homeobox protein PKNOX1 OS=Mus mu...262.3     31.2     50     69GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:BHF-UCL.
GO:0001525; P:angiogenesis; IMP:MGI.::GO:0043010; P:camera-type eye development; IMP:MGI.::GO:0030218; P:erythrocyte differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0030217; P:T cell differentiation; IMP:MGI.
735O73917    437   PAX6_ORYLA Paired box protein Pax-6 OS=Oryzia...582.3     31.2     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
736O43364    376   HXA2_HUMAN Homeobox protein Hox-A2 OS=Homo sa...422.3     31.2     38     57GO:0005634; C:nucleus; IDA:HPA.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
737Q08727    375   HXA2_CHICK Homeobox protein Hox-A2 OS=Gallus ...422.4     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
738A9L937    377   HXA2_PAPAN Homeobox protein Hox-A2 OS=Papio a...422.4     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
739Q1KKZ2    300   HXA2B_TAKRU Homeobox protein Hox-A2b OS=Takif...422.4     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
740P51783    162   HXA9_CAVPO Homeobox protein Hox-A9 OS=Cavia p...422.4     30.8     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
741Q9PVR2    271   HXD9_ORYLA Homeobox protein Hox-D9 OS=Oryzias...422.4     31.2     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
742Q9IA24    229   HXA6_HETFR Homeobox protein Hox-A6 OS=Heterod...422.4     30.8     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
743P79745    443   P3F3B_DANRE POU domain, class 3, transcriptio...552.4     31.2     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
744P31269    272   HXA9_HUMAN Homeobox protein Hox-A9 OS=Homo sa...422.4     30.8     38     57
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
745Q1KKZ5    284   HXABB_TAKRU Homeobox protein Hox-A11b OS=Taki...612.4     30.8     28     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
746P20265    443   PO3F2_HUMAN POU domain, class 3, transcriptio...552.4     31.2     29     49
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0008284; P:positive regulation of cell proliferation; IDA:MGI.
747P56222    445   PO3F2_RAT POU domain, class 3, transcription ...552.4     31.2     29     49
GO:0071837; F:HMG box domain binding; IDA:UniProtKB.::GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:RGD.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:RGD.
748P31360    445   PO3F2_MOUSE POU domain, class 3, transcriptio...552.4     31.2     29     49GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.
GO:0014002; P:astrocyte development; IMP:MGI.::GO:0071310; P:cellular response to organic substance; IDA:MGI.::GO:0021799; P:cerebral cortex radially oriented cell migration; IGI:MGI.::GO:0008544; P:epidermis development; IMP:MGI.::GO:0021869; P:forebrain ventricular zone progenitor cell division; IGI:MGI.::GO:0021979; P:hypothalamus cell differentiation; IMP:MGI.::GO:0022011; P:myelination in peripheral nervous system; IGI:MGI.::GO:0021985; P:neurohypophysis development; IMP:MGI.::GO:0030182; P:neuron differentiation; IDA:MGI.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:MGI.::GO:0050770; P:regulation of axonogenesis; IMP:MGI.
749P50209    143   HXA9_AMBME Homeobox protein Hox-A9 OS=Ambysto...422.4     30.8     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
750O70137    343   ALX3_MOUSE Homeobox protein aristaless-like 3...402.5     31.2     33     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0035115; P:embryonic forelimb morphogenesis; IGI:MGI.::GO:0035116; P:embryonic hindlimb morphogenesis; IGI:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IGI:MGI.::GO:0007389; P:pattern specification process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
751P52906    323   UNC30_CAEEL Homeobox protein unc-30 OS=Caenor...402.5     30.8     38     58GO:0005634; C:nucleus; IDA:WormBase.
GO:0000983; F:RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity; IC:WormBase.::GO:0043565; F:sequence-specific DNA binding; IDA:WormBase.
GO:0033563; P:dorsal/ventral axon guidance; IMP:WormBase.::GO:0097154; P:GABAergic neuron differentiation; IMP:WormBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.
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