Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661P14858    234   HXC6_NOTVI Homeobox protein Hox-C6 OS=Notopht...421.5     31.6     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
662Q9DDU1    283   HXABB_DANRE Homeobox protein Hox-A11b OS=Dani...621.6     31.6     27     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
663P27610    476   HMIN_BOMMO Homeobox protein invected OS=Bomby...591.6     31.6     32     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
664P97368    378   MEIS3_MOUSE Homeobox protein Meis3 OS=Mus mus...431.6     31.6     40     60GO:0005634; C:nucleus; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0043066; P:negative regulation of apoptotic process; IMP:MGI.::GO:0051897; P:positive regulation of protein kinase B signaling cascade; IMP:MGI.
665Q28600    71   HXA7_SHEEP Homeobox protein Hox-A7 OS=Ovis ar...551.6     30     27     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
666P63015    422   PAX6_MOUSE Paired box protein Pax-6 OS=Mus mu...581.6     31.6     26     52GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005667; C:transcription factor complex; TAS:MGI.
GO:0070410; F:co-SMAD binding; IDA:BHF-UCL.::GO:0035035; F:histone acetyltransferase binding; IDA:BHF-UCL.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:BHF-UCL.::GO:0070412; F:R-SMAD binding; IDA:BHF-UCL.::GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:BHF-UCL.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; IPI:BHF-UCL.::GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
GO:0048708; P:astrocyte differentiation; IMP:MGI.::GO:0007411; P:axon guidance; IMP:MGI.::GO:0001709; P:cell fate determination; IMP:MGI.::GO:0021796; P:cerebral cortex regionalization; IMP:MGI.::GO:0021902; P:commitment of neuronal cell to specific neuron type in forebrain; IMP:MGI.::GO:0009950; P:dorsal/ventral axis specification; IMP:MGI.::GO:0048596; P:embryonic camera-type eye morphogenesis; IGI:MGI.::GO:0042462; P:eye photoreceptor cell development; IMP:MGI.::GO:0021797; P:forebrain anterior/posterior pattern specification; IMP:MGI.::GO:0021798; P:forebrain dorsal/ventral pattern formation; IMP:MGI.::GO:0021905; P:forebrain-midbrain boundary formation; IMP:MGI.::GO:0030216; P:keratinocyte differentiation; IMP:MGI.::GO:0032808; P:lacrimal gland development; IMP:MGI.::GO:0002088; P:lens development in camera-type eye; IMP:MGI.::GO:0050680; P:negative regulation of epithelial cell proliferation; IMP:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IGI:MGI.::GO:0001764; P:neuron migration; IMP:MGI.::GO:0021778; P:oligodendrocyte cell fate specification; IMP:MGI.::GO:0003322; P:pancreatic A cell development; IMP:BHF-UCL.::GO:0021983; P:pituitary gland development; IMP:MGI.::GO:0030858; P:positive regulation of epithelial cell differentiation; IMP:MGI.::GO:0002052; P:positive regulation of neuroblast proliferation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0033365; P:protein localization to organelle; IMP:MGI.::GO:0030334; P:regulation of cell migration; IMP:MGI.::GO:0048505; P:regulation of timing of cell differentiation; IMP:MGI.::GO:0021918; P:regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment; IMP:MGI.::GO:0021912; P:regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification; IMP:MGI.::GO:0021913; P:regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification; IMP:MGI.::GO:0007435; P:salivary gland morphogenesis; IMP:MGI.::GO:0023019; P:signal transduction involved in regulation of gene expression; IDA:MGI.::GO:0007224; P:smoothened signaling pathway; IDA:MGI.
667P26367    422   PAX6_HUMAN Paired box protein Pax-6 OS=Homo s...581.6     31.6     26     52GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO:0035035; F:histone acetyltransferase binding; ISS:BHF-UCL.::GO:0019901; F:protein kinase binding; ISS:BHF-UCL.::GO:0070412; F:R-SMAD binding; IPI:BHF-UCL.::GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:BHF-UCL.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0001568; P:blood vessel development; IMP:DFLAT.::GO:0061303; P:cornea development in camera-type eye; IMP:DFLAT.::GO:0042593; P:glucose homeostasis; IMP:DFLAT.::GO:0061072; P:iris morphogenesis; IMP:DFLAT.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0003322; P:pancreatic A cell development; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0009611; P:response to wounding; IEP:UniProtKB.::GO:0007601; P:visual perception; TAS:ProtInc.
668P53406    359   ISL2A_DANRE Insulin gene enhancer protein isl...271.6     31.6     44     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048676; P:axon extension involved in development; IMP:ZFIN.::GO:0048665; P:neuron fate specification; IMP:ZFIN.
669A2T763    232   NANG2_PANTR Putative homeobox protein NANOG2 ...621.6     31.6     29     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
670P50480    360   ISL2_RAT Insulin gene enhancer protein ISL-2 ...271.6     31.6     44     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
671P09636    75   HXA7_SALSA Homeobox protein Hox-A7 OS=Salmo s...551.6     30     27     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
672P13545    308   HMB1_STRPU Homeobox protein HB1 OS=Strongyloc...421.6     31.6     33     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
673P81193    70   CDX_LINSA Homeobox protein CDX OS=Lineus sang...421.6     30     31     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
674P26630    437   PAX6_DANRE Paired box protein Pax-6 OS=Danio ...581.6     31.6     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
675P10181    350   ROUGH_DROME Homeobox protein rough OS=Drosoph...421.6     31.6     31     60GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0001012; F:RNA polymerase II regulatory region DNA binding; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0042067; P:establishment of ommatidial planar polarity; IMP:UniProtKB.::GO:0045680; P:negative regulation of R8 cell differentiation; NAS:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0007463; P:R2/R5 cell fate commitment; IMP:UniProtKB.::GO:0045464; P:R8 cell fate specification; TAS:FlyBase.::GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
676P55864    422   PAX6_XENLA Paired box protein Pax-6 OS=Xenopu...581.6     31.6     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
677Q8TE12    382   LMX1A_HUMAN LIM homeobox transcription factor...631.6     31.6     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
678P27609    372   HMEN_BOMMO Segmentation polarity homeobox pro...651.6     31.6     26     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007367; P:segment polarity determination; IEA:UniProtKB-KW.
679P63016    422   PAX6_RAT Paired box protein Pax-6 OS=Rattus n...581.6     31.6     26     52GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.
GO:0003680; F:AT DNA binding; IDA:RGD.::GO:0003690; F:double-stranded DNA binding; IDA:RGD.::GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IC:BHF-UCL.::GO:0000981; F:sequence-specific DNA binding RNA polymerase II transcription factor activity; IC:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.
GO:0030902; P:hindbrain development; IDA:RGD.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0001764; P:neuron migration; IMP:RGD.::GO:0003322; P:pancreatic A cell development; IMP:BHF-UCL.::GO:0042660; P:positive regulation of cell fate specification; IMP:RGD.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IC:BHF-UCL.::GO:0050678; P:regulation of epithelial cell proliferation; IMP:RGD.::GO:0045664; P:regulation of neuron differentiation; IDA:RGD.
680Q9PWL6    250   HXA9A_DANRE Homeobox protein Hox-A9a OS=Danio...421.7     31.6     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
681O42567    325   RXB_XENLA Retinal homeobox protein Rx-B OS=Xe...401.7     31.6     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
682Q2HJ84    436   PKNX1_BOVIN Homeobox protein PKNOX1 OS=Bos ta...261.7     31.6     50     69
683P10629    235   HXC6_MOUSE Homeobox protein Hox-C6 OS=Mus mus...421.7     31.2     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
684P09630    235   HXC6_HUMAN Homeobox protein Hox-C6 OS=Homo sa...421.7     31.2     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0007275; P:multicellular organismal development; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
685Q99687    375   MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sa...431.7     31.6     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
686P09013    276   HXB5B_DANRE Homeobox protein Hox-B5b OS=Danio...691.7     31.6     23     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007420; P:brain development; IMP:ZFIN.::GO:0010002; P:cardioblast differentiation; IMP:ZFIN.::GO:0001708; P:cell fate specification; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
687Q9PWD5    269   HXA9_MORSA Homeobox protein Hox-A9 OS=Morone ...421.7     31.6     38     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
688O42201    322   RXA_XENLA Retinal homeobox protein Rx-A OS=Xe...401.7     31.6     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
689Q1KKT1    265   HXDBA_TAKRU Homeobox protein Hox-D11a OS=Taki...611.7     31.2     26     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
690Q9CXV0    359   ISL2_MOUSE Insulin gene enhancer protein ISL-...271.7     31.6     44     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045665; P:negative regulation of neuron differentiation; IMP:MGI.::GO:0031290; P:retinal ganglion cell axon guidance; IMP:MGI.::GO:0021520; P:spinal cord motor neuron cell fate specification; IGI:MGI.::GO:0021524; P:visceral motor neuron differentiation; IMP:MGI.
691Q9I9D5    334   RX1_ASTFA Retinal homeobox protein Rx1 OS=Ast...401.8     31.6     33     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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