Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q5U4X3    453   MEI3A_XENLA Homeobox protein meis3-A OS=Xenop...290.42     33.1     45     72GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0030902; P:hindbrain development; IMP:UniProtKB.::GO:0043410; P:positive regulation of MAPK cascade; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
512P97367    477   MEIS2_MOUSE Homeobox protein Meis2 OS=Mus mus...290.43     33.1     45     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0001654; P:eye development; IGI:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.
513O14770    477   MEIS2_HUMAN Homeobox protein Meis2 OS=Homo sa...290.43     33.1     45     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
514Q05095    123   CDX1_RAT Homeobox protein CDX-1 OS=Rattus nor...450.43     32.3     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:RGD.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
515P17481    243   HXB8_HUMAN Homeobox protein Hox-B8 OS=Homo sa...420.43     33.1     40     60GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
516Q0WV12    802   ANL2_ARATH Homeobox-leucine zipper protein AN...610.43     33.5     30     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0043481; P:anthocyanin accumulation in tissues in response to UV light; IMP:TAIR.::GO:0048765; P:root hair cell differentiation; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
517Q96QS3    562   ARX_HUMAN Homeobox protein ARX OS=Homo sapien...580.44     33.1     26     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
518O35085    564   ARX_MOUSE Homeobox protein ARX OS=Mus musculu...580.44     33.1     26     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007411; P:axon guidance; IMP:MGI.::GO:0021846; P:cell proliferation in forebrain; IMP:MGI.::GO:0021853; P:cerebral cortex GABAergic interneuron migration; IMP:MGI.::GO:0021800; P:cerebral cortex tangential migration; IMP:MGI.::GO:0021831; P:embryonic olfactory bulb interneuron precursor migration; IMP:MGI.::GO:0021759; P:globus pallidus development; IMP:MGI.::GO:0001764; P:neuron migration; IMP:MGI.::GO:0046622; P:positive regulation of organ growth; IMP:MGI.::GO:0042127; P:regulation of cell proliferation; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
519A6YP92    566   ARX_RAT Homeobox protein ARX OS=Rattus norveg...580.44     33.1     26     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
520P13378    290   HXD8_HUMAN Homeobox protein Hox-D8 OS=Homo sa...790.44     33.1     28     53GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0008595; P:anterior/posterior axis specification, embryo; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
521Q94166    261   HM33_CAEEL Homeobox protein ceh-33 OS=Caenorh...470.44     33.1     34     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
522Q9DE09    333   HMX1_CHICK Homeobox protein HMX1 OS=Gallus ga...380.44     33.1     39     61GO:0005634; C:nucleus; IC:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
523Q09602    416   YRM6_CAEEL Uncharacterized homeobox protein R...590.44     33.1     25     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
524Q03828    476   EVX2_HUMAN Homeobox even-skipped homolog prot...530.44     33.1     26     57GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
525Q2PYN8    267   LBX1_XENLA Transcription factor LBX1 OS=Xenop...420.45     33.1     33     67GO:0005667; C:transcription factor complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; IMP:UniProtKB.::GO:0051450; P:myoblast proliferation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
526P02835    410   FTZ_DROME Segmentation protein fushi tarazu O...420.47     33.1     29     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:FlyBase.::GO:0000980; F:RNA polymerase II distal enhancer sequence-specific DNA binding; IDA:FlyBase.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:FlyBase.
GO:0001708; P:cell fate specification; TAS:FlyBase.::GO:0007417; P:central nervous system development; TAS:FlyBase.::GO:0008354; P:germ cell migration; IMP:FlyBase.::GO:0007506; P:gonadal mesoderm development; IMP:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0007366; P:periodic partitioning by pair rule gene; NAS:FlyBase.::GO:0035289; P:posterior head segmentation; TAS:FlyBase.::GO:0035290; P:trunk segmentation; TAS:FlyBase.
527P78367    333   NKX32_HUMAN Homeobox protein Nkx-3.2 OS=Homo ...420.47     33.1     33     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0032331; P:negative regulation of chondrocyte differentiation; ISS:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
528P29555    590   ABDA_DROME Homeobox protein abdominal-A OS=Dr...420.47     33.1     33     57GO:0005667; C:transcription factor complex; IPI:FlyBase.
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.
GO:0006915; P:apoptotic process; IMP:FlyBase.::GO:0048738; P:cardiac muscle tissue development; IMP:FlyBase.::GO:0010002; P:cardioblast differentiation; IMP:FlyBase.::GO:0035225; P:determination of genital disc primordium; IMP:FlyBase.::GO:0035053; P:dorsal vessel heart proper cell fate commitment; IMP:FlyBase.::GO:0035224; P:genital disc anterior/posterior pattern formation; IEP:FlyBase.::GO:0048806; P:genitalia development; IMP:FlyBase.::GO:0007506; P:gonadal mesoderm development; IMP:FlyBase.::GO:0007501; P:mesodermal cell fate specification; IMP:FlyBase.::GO:0007494; P:midgut development; TAS:FlyBase.::GO:0014019; P:neuroblast development; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:FlyBase.::GO:0007438; P:oenocyte development; IMP:FlyBase.::GO:0007422; P:peripheral nervous system development; TAS:FlyBase.::GO:0007280; P:pole cell migration; TAS:FlyBase.::GO:0048636; P:positive regulation of muscle organ development; IMP:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.
529Q8JJ64    306   HMX3_XENLA Homeobox protein HMX3 OS=Xenopus l...380.47     33.1     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
530Q9R0W1    324   PITX2_RAT Pituitary homeobox 2 OS=Rattus norv...400.47     33.1     38     60
GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:RGD.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IDA:RGD.
GO:0008585; P:female gonad development; IEP:RGD.::GO:0008584; P:male gonad development; IEP:RGD.::GO:0030182; P:neuron differentiation; IEP:RGD.::GO:0042475; P:odontogenesis of dentin-containing tooth; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IEP:RGD.::GO:0033189; P:response to vitamin A; IEP:RGD.
531Q0P4H6    265   LBX1_XENTR Transcription factor LBX1 OS=Xenop...420.48     33.1     33     67GO:0005667; C:transcription factor complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; ISS:UniProtKB.::GO:0051450; P:myoblast proliferation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
532Q91989    426   P5F13_XENLA POU domain, class 5, transcriptio...750.48     33.1     28     48GO:0005667; C:transcription factor complex; IPI:UniProtKB.
GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0032926; P:negative regulation of activin receptor signaling pathway; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
533Q28503    291   PIT1_MACMU Pituitary-specific positive transc...590.49     33.1     34     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
534Q9GLL9    226   PROP1_PIG Homeobox protein prophet of Pit-1 O...530.49     32.7     28     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
535Q0P4W6    306   HMX3_XENTR Homeobox protein HMX3 OS=Xenopus t...380.49     33.1     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
536P97503    333   NKX32_MOUSE Homeobox protein Nkx-3.2 OS=Mus m...420.5     33.1     33     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007368; P:determination of left/right symmetry; IMP:MGI.::GO:0048706; P:embryonic skeletal system development; IMP:MGI.::GO:0060576; P:intestinal epithelial cell development; IGI:MGI.::GO:0042474; P:middle ear morphogenesis; IMP:MGI.::GO:0043066; P:negative regulation of apoptotic process; IMP:MGI.::GO:0032331; P:negative regulation of chondrocyte differentiation; IMP:UniProtKB.::GO:0048645; P:organ formation; IMP:MGI.::GO:0031016; P:pancreas development; IMP:MGI.::GO:0048705; P:skeletal system morphogenesis; IMP:MGI.::GO:0048536; P:spleen development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
537Q90470    276   HXDBA_DANRE Homeobox protein Hox-D11a OS=Dani...610.51     32.7     28     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
538Q557C9    1723   HBX5_DICDI Homeobox protein 5 OS=Dictyosteliu...300.51     33.1     50     73GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
539P79937    390   MEIS1_XENLA Homeobox protein Meis1 OS=Xenopus...290.52     33.1     45     72GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005667; C:transcription factor complex; IGI:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0014036; P:neural crest cell fate specification; IGI:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
540Q60954    390   MEIS1_MOUSE Homeobox protein Meis1 OS=Mus mus...290.52     33.1     45     72GO:0005634; C:nucleus; IDA:MGI.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0001525; P:angiogenesis; IMP:MGI.::GO:0048514; P:blood vessel morphogenesis; IMP:MGI.::GO:0060216; P:definitive hemopoiesis; IMP:MGI.::GO:0030097; P:hemopoiesis; IMP:MGI.::GO:0002089; P:lens morphogenesis in camera-type eye; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
541Q27350    416   SO_DROME Protein sine oculis OS=Drosophila me...470.52     33.1     30     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.::GO:0008134; F:transcription factor binding; IPI:FlyBase.
GO:0001746; P:Bolwig's organ morphogenesis; IMP:FlyBase.::GO:0007623; P:circadian rhythm; IGI:FlyBase.::GO:0001745; P:compound eye morphogenesis; IMP:FlyBase.::GO:0009649; P:entrainment of circadian clock; IMP:FlyBase.::GO:0007455; P:eye-antennal disc morphogenesis; TAS:FlyBase.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0001744; P:optic lobe placode formation; IMP:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0035271; P:ring gland development; IMP:FlyBase.::GO:0007283; P:spermatogenesis; IMP:FlyBase.
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