Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR097W
Length:
126
Number of sequences:
5887
Description:
YCR097W HMRA1 SGDID:S000000694, Chr III from 293835-293939,293994-294239,294292-294321, Genome Release 64-1-1, Verified ORF, "Silenced copy of a1 at HMR; homeobox corepressor that interacts with Alpha2p to repress haploid-specific gene transcription in diploid cells"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391Q9IA25    208   HXA7_HETFR Homeobox protein Hox-A7 OS=Heterod...1190.12     34.7     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
392Q9IA21    410   HXA3_HETFR Homeobox protein Hox-A3 OS=Heterod...670.13     34.7     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
393P34684    253   LIN39_CAEEL Homeobox protein lin-39 OS=Caenor...420.13     34.7     40     60GO:0005634; C:nucleus; IDA:WormBase.
GO:0043565; F:sequence-specific DNA binding; IDA:WormBase.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:WormBase.::GO:0007411; P:axon guidance; IMP:WormBase.::GO:0016477; P:cell migration; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0045026; P:plasma membrane fusion; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0051302; P:regulation of cell division; IMP:WormBase.::GO:0042659; P:regulation of cell fate specification; IMP:WormBase.::GO:0040025; P:vulval development; IEP:WormBase.
394Q1KKX5    391   HXB1A_TAKRU Homeobox protein Hox-B1a OS=Takif...530.13     34.7     28     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
395Q4LAL6    397   ALX4_BOVIN Homeobox protein aristaless-like 4...580.13     34.7     26     57GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
396O35137    399   ALX4_MOUSE Homeobox protein aristaless-like 4...580.13     34.7     26     57GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048565; P:digestive tract development; IMP:MGI.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0035115; P:embryonic forelimb morphogenesis; IGI:MGI.::GO:0035116; P:embryonic hindlimb morphogenesis; IGI:MGI.::GO:0048704; P:embryonic skeletal system morphogenesis; IMP:MGI.::GO:0007517; P:muscle organ development; IMP:MGI.::GO:0060021; P:palate development; IGI:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0009791; P:post-embryonic development; IMP:MGI.::GO:0042981; P:regulation of apoptotic process; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
397Q9H161    411   ALX4_HUMAN Homeobox protein aristaless-like 4...580.13     34.7     26     57
GO:0001942; P:hair follicle development; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
398Q9BZE3    327   BARH1_HUMAN BarH-like 1 homeobox protein OS=H...750.13     34.7     28     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
399B3DM25    459   P5F11_XENTR POU domain, class 5, transcriptio...700.13     34.7     27     50GO:0005667; C:transcription factor complex; ISS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0046332; F:SMAD binding; ISS:UniProtKB.::GO:0008134; F:transcription factor binding; ISS:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; ISS:UniProtKB.
GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0032926; P:negative regulation of activin receptor signaling pathway; ISS:UniProtKB.::GO:0030514; P:negative regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0045605; P:negative regulation of epidermal cell differentiation; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0050767; P:regulation of neurogenesis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
400P18866    108   HXC8_RAT Homeobox protein Hox-C8 OS=Rattus no...540.13     33.5     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
401Q91169    365   PIT1_ONCKE Pituitary-specific positive transc...590.14     34.7     37     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
402P20822    385   UBX_DROPS Homeotic protein ultrabithorax OS=D...550.14     34.7     27     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
403P14651    431   HXB3_HUMAN Homeobox protein Hox-B3 OS=Homo sa...670.14     34.7     31     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0001525; P:angiogenesis; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
404P09026    433   HXB3_MOUSE Homeobox protein Hox-B3 OS=Mus mus...670.14     34.7     31     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000979; F:RNA polymerase II core promoter sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0048704; P:embryonic skeletal system morphogenesis; IMP:MGI.::GO:0060324; P:face development; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0050767; P:regulation of neurogenesis; IDA:MGI.::GO:0021546; P:rhombomere development; IDA:MGI.::GO:0030878; P:thyroid gland development; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
405O93367    297   TLX3_CHICK T-cell leukemia homeobox protein 3...400.14     34.7     40     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
406P87394    131   DLX4_ELECQ Homeobox protein DLX-4 OS=Eleuther...360.15     33.9     39     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
407O42368    417   HXB3A_DANRE Homeobox protein Hox-B3a OS=Danio...670.15     34.7     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
408Q8SUB7    157   HD1_ENCCU Homeobox protein HD-1 OS=Encephalit...630.16     34.3     37     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
409Q8AWZ2    410   HXA3A_DANRE Homeobox protein Hox-A3a OS=Danio...670.16     34.7     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
410O43763    284   TLX2_HUMAN T-cell leukemia homeobox protein 2...400.16     34.3     40     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
411O02491    594   HMEN_ANOGA Segmentation polarity homeobox pro...600.16     34.7     28     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007367; P:segment polarity determination; IEA:UniProtKB-KW.
412Q61663    284   TLX2_MOUSE T-cell leukemia homeobox protein 2...400.16     34.3     40     63GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:MGI.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0048484; P:enteric nervous system development; IMP:MGI.::GO:0001707; P:mesoderm formation; IMP:MGI.::GO:0050774; P:negative regulation of dendrite morphogenesis; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
413A1L2P5    413   HXD3_XENLA Homeobox protein Hox-D3 OS=Xenopus...660.17     34.3     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
414Q6RFL5    233   BSH_CHICK Brain-specific homeobox protein hom...420.17     34.3     36     64
GO:0007420; P:brain development; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
415O93590    224   ZAX_XENLA Homeobox protein zampogna OS=Xenopu...420.18     34.3     33     64GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
416P31273    242   HXC8_HUMAN Homeobox protein Hox-C8 OS=Homo sa...420.18     34.3     40     60GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
417Q90963    165   PRRX2_CHICK Paired mesoderm homeobox protein ...400.18     33.9     35     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
418P09025    242   HXC8_MOUSE Homeobox protein Hox-C8 OS=Mus mus...420.18     34.3     40     60GO:0005634; C:nucleus; IDA:MGI.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0030182; P:neuron differentiation; IMP:MGI.::GO:0048705; P:skeletal system morphogenesis; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
419Q9YH13    242   HXC8_CHICK Homeobox protein Hox-C8 OS=Gallus ...420.19     34.3     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0000976; F:transcription regulatory region sequence-specific DNA binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
420Q62232    296   SIX2_MOUSE Homeobox protein SIX2 OS=Mus muscu...470.19     34.3     32     57GO:0005634; C:nucleus; IDA:MGI.
GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0008283; P:cell proliferation; IMP:MGI.::GO:0002062; P:chondrocyte differentiation; IMP:MGI.::GO:0048701; P:embryonic cranial skeleton morphogenesis; IMP:MGI.::GO:0003337; P:mesenchymal to epithelial transition involved in metanephros morphogenesis; IEP:UniProtKB.::GO:0007501; P:mesodermal cell fate specification; IDA:UniProtKB.::GO:0042474; P:middle ear morphogenesis; IGI:MGI.::GO:0045596; P:negative regulation of cell differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006606; P:protein import into nucleus; IDA:MGI.
421Q90270    472   PO5F1_DANRE POU domain, class 5, transcriptio...550.19     34.3     31     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IGI:ZFIN.
GO:0035284; P:brain segmentation; IMP:ZFIN.::GO:0009953; P:dorsal/ventral pattern formation; IMP:ZFIN.::GO:0007398; P:ectoderm development; IMP:ZFIN.::GO:0009880; P:embryonic pattern specification; IMP:ZFIN.::GO:0001706; P:endoderm formation; IMP:ZFIN.::GO:0055113; P:epiboly involved in gastrulation with mouth forming second; IMP:ZFIN.::GO:0031101; P:fin regeneration; IMP:ZFIN.::GO:0030902; P:hindbrain development; IMP:ZFIN.::GO:0007498; P:mesoderm development; IMP:ZFIN.::GO:0016331; P:morphogenesis of embryonic epithelium; IMP:ZFIN.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IGI:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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