Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR092C
Length:
1018
Number of sequences:
5887
Description:
YCR092C MSH3 SGDID:S000000688, Chr III from 279820-276764, Genome Release 64-1-1, reverse complement, Verified ORF, "Mismatch repair protein, forms dimers with Msh2p that mediate repair of insertion or deletion mutations and removal of nonhomologous DNA ends, contains a PCNA (Pol30p) binding motif required for genome stability"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811Q3KKA1    261   ZNUC_PSEPF Zinc import ATP-binding protein Zn...1021.5     35.8     27     48GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
812Q4KKK4    261   ZNUC_PSEF5 Zinc import ATP-binding protein Zn...1022.1     35.4     27     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
813Q5GRS1    246   ZNUC_WOLTR Zinc import ATP-binding protein Zn...652.6     35     38     58GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
814Q84TG9    458   TBB_PORYE Tubulin beta chain OS=Porphyra yezo...883.2     35     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0051258; P:protein polymerization; IEA:InterPro.
815P50259    457   TBB_PORPU Tubulin beta chain OS=Porphyra purp...883.3     35     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0051258; P:protein polymerization; IEA:InterPro.
816Q66AT7    253   ZNUC_YERPS Zinc import ATP-binding protein Zn...634.6     34.3     38     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
817Q1CJG3    253   ZNUC_YERPN Zinc import ATP-binding protein Zn...634.7     34.3     38     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
818Q7CIC2    253   ZNUC_YERPE Zinc import ATP-binding protein Zn...634.7     34.3     38     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
819Q1C812    253   ZNUC_YERPA Zinc import ATP-binding protein Zn...634.7     34.3     38     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015633; F:zinc transporting ATPase activity; IEA:InterPro.
820Q2GD90    1358   RPOB_NEOSM DNA-directed RNA polymerase subuni...1058     34.3     25     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
821Q93MK8    1363   RPOB_EHRRI DNA-directed RNA polymerase subuni...1059     33.9     25     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 821 811 - 821
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::