Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR084C
Length:
713
Number of sequences:
5887
Description:
YCR084C TUP1 SGDID:S000000680, Chr III from 262452-260311, Genome Release 64-1-1, reverse complement, Verified ORF, "General repressor of transcription, forms complex with Cyc8p, involved in the establishment of repressive chromatin structure through interactions with histones H3 and H4, appears to enhance expression of some genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...1880.084     40     22     43GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
422Q55AR8    355   SNR40_DICDI U5 small nuclear ribonucleoprotei...650.022     41.2     26     55GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:dictyBase.
423Q5R664    906   COPB2_PONAB Coatomer subunit beta' OS=Pongo a...1880.091     40     22     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
424Q5SP67    576   WDR26_DANRE WD repeat-containing protein 26 O...2650.0000009     55.8     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
425P0CS46    712   PFS2_CRYNJ Polyadenylation factor subunit 2 O...2450.0000008     56.2     26     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
426Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...1820.0000001     58.9     24     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
427A2QP30    443   LIS1_ASPNC Nuclear distribution protein nudF ...2050.00000009     58.9     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
428P93471    672   COP1_PEA E3 ubiquitin-protein ligase COP1 OS=...1284.9     34.3     20     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
429Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...2220.00004     50.8     23     39GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
430P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...2390.000000005     62.4     28     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
431Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...2650.0000000000009     75.5     25     44GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
432Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...3610.0000000000002     77     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
433P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...2330.00000000006     68.6     27     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
434Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...2800.0000000001     68.2     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
435Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...2800.0000000001     68.2     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
436Q6P0D9    330   CIAO1_DANRE Probable cytosolic iron-sulfur pr...850.0002     47.8     34     56
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
437Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...2590.00000004     59.7     23     42
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
438A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...2460.000000001     65.5     23     41GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
439Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...2810.0000000002     68.6     23     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
440Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...2730.0000000000003     75.9     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
441Q9LV28    326   GPLPC_ARATH Guanine nucleotide-binding protei...1370.0000005     55.8     31     46GO:0005730; C:nucleolus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
442Q7ZXZ2    515   UTP15_XENLA U3 small nucleolar RNA-associated...1318     33.5     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
443Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...3210.0006     47     21     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
444P43254    675   COP1_ARATH E3 ubiquitin-protein ligase COP1 O...1280.049     40.8     20     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000152; C:nuclear ubiquitin ligase complex; TAS:TAIR.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046283; P:anthocyanin metabolic process; IMP:TAIR.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009649; P:entrainment of circadian clock; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IGI:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0009641; P:shade avoidance; IMP:TAIR.::GO:0009647; P:skotomorphogenesis; TAS:TAIR.
445Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...1360.015     42     28     42GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
446Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...2310.0000000003     67     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
447P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...2610.000000005     63.2     25     45GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
448Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...1360.01     42.4     28     42GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
449O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...785.9     33.9     33     49GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
450Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...2880.00000000003     69.7     23     40GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
451Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...2360.000000000001     74.3     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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