Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR081W
Length:
1427
Number of sequences:
5887
Description:
YCR081W SRB8 SGDID:S000000677, Chr III from 254371-258654, Genome Release 64-1-1, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in glucose repression"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25648    1427   SRB8_YEAST Mediator of RNA polymerase II tran...14270     2919     100     100GO:0016592; C:mediator complex; IDA:SGD.
GO:0001105; F:RNA polymerase II transcription coactivator activity; IDA:SGD.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000411; P:positive regulation of transcription by galactose; IMP:SGD.
2Q6FVM9    1358   SRB8_CANGA Mediator of RNA polymerase II tran...14450     1140     44     64GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
3Q751D2    1358   SRB8_ASHGO Mediator of RNA polymerase II tran...14470     1058     41     62GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
4Q6CKZ5    1322   SRB8_KLULA Mediator of RNA polymerase II tran...14340     860     38     57GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
5Q6C229    1362   SRB8_YARLI Mediator of RNA polymerase II tran...7161e-35     152     25     43GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
6A3GF47    1654   SRB8_PICST Mediator of RNA polymerase II tran...8454e-34     147     24     43GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
7A1D887    1612   SRB8_NEOFI Mediator of RNA polymerase II tran...4732e-28     129     25     43GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
8Q4WWL0    1617   SRB8_ASPFU Mediator of RNA polymerase II tran...6482e-28     128     23     41GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
9Q5B3Y9    1582   SRB8_EMENI Mediator of RNA polymerase II tran...4462e-26     121     24     46GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
10Q0CBX9    1583   SRB8_ASPTN Mediator of RNA polymerase II tran...2836e-26     120     29     49GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
11Q7SGG0    1789   SRB8_NEUCR Mediator of RNA polymerase II tran...5357e-26     120     24     42GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
12A1CJ92    1591   SRB8_ASPCL Mediator of RNA polymerase II tran...3038e-26     120     28     50GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
13Q2U513    1594   SRB8_ASPOR Mediator of RNA polymerase II tran...2663e-24     115     28     51GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
14Q0V6H6    1547   SRB8_PHANO Mediator of RNA polymerase II tran...2776e-24     114     30     51GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
15Q6BUQ1    1661   SRB8_DEBHA Mediator of RNA polymerase II tran...5150.00000001     63.9     23     40GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
16Q1EAK2    1491   SRB8_COCIM Mediator of RNA polymerase II tran...2282e-20     102     29     51GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
17Q9P6L8    1134   SRB8_SCHPO Mediator of RNA polymerase II tran...2730.0000003     59.3     24     40GO:0016592; C:mediator complex; IDA:PomBase.
GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:PomBase.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.
18Q4P456    1876   SRB8_USTMA Mediator of RNA polymerase II tran...1540.003     45.8     24     45GO:0016592; C:mediator complex; IEA:InterPro.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
19Q54U49    2731   MED12_DICDI Putative mediator of RNA polymera...3160.004     45.8     21     39GO:0016592; C:mediator complex; ISS:dictyBase.
GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:dictyBase.
20Q5RCU2    2181   MED12_PONPY Mediator of RNA polymerase II tra...1680.17     40.4     26     42GO:0016592; C:mediator complex; IEA:InterPro.
GO:0008013; F:beta-catenin binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
21Q93074    2177   MED12_HUMAN Mediator of RNA polymerase II tra...1680.17     40.4     26     42GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IEA:InterPro.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; NAS:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0004872; F:receptor activity; IDA:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB.::GO:0046966; F:thyroid hormone receptor binding; IDA:UniProtKB.::GO:0042809; F:vitamin D receptor binding; NAS:UniProtKB.
GO:0030521; P:androgen receptor signaling pathway; IDA:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:UniProtKB.
22A2AGH6    2190   MED12_MOUSE Mediator of RNA polymerase II tra...1682     37     24     42GO:0016592; C:mediator complex; IDA:MGI.
GO:0008013; F:beta-catenin binding; IEA:InterPro.
23Q32LL9    339   CENPN_BOVIN Centromere protein N OS=Bos tauru...1393.8     35.4     27     40GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
24A2BU03    490   GATB_PROM5 Aspartyl/glutamyl-tRNA(Asn/Gln) am...714.3     35.4     30     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016884; F:carbon-nitrogen ligase activity, with glutamine as amido-N-donor; IEA:InterPro.
GO:0006412; P:translation; IEA:UniProtKB-KW.
25Q54HL0    898   COPG_DICDI Coatomer subunit gamma OS=Dictyost...669.7     34.3     32     58GO:0005813; C:centrosome; IDA:dictyBase.::GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:dictyBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
records
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