Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...5150     1064     100     100GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
2O74855    502   NLE1_SCHPO Ribosome assembly protein C18.05c ...5150     602     56     74GO:0005730; C:nucleolus; ISS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042254; P:ribosome biogenesis; ISS:PomBase.
3Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...3294e-22     102     27     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
4Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...4936e-159     468     47     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
5Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...5025e-158     466     47     65GO:0005730; C:nucleolus; IDA:HPA.
6Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...4913e-157     464     47     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
7Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...4923e-155     458     47     66GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
8Q00808    1356   HETE1_PODAS Vegetative incompatibility protei...480.53     37     35     56
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
9Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...990.0002     48.1     32     49
10Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...750.00005     49.7     33     60
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
11Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...1410.16     38.5     26     40
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
12Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...3581e-38     150     29     48GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
13Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...3816e-35     144     27     45
GO:0005488; F:binding; IEA:InterPro.
14Q5FWQ6    415   WDR69_XENLA Outer row dynein assembly protein...860.0007     45.8     28     49GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
15Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...860.0006     45.8     28     49GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
16Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...3337e-30     124     26     45GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
17Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...2276e-23     104     27     50GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
18Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...2273e-23     105     28     50GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
19Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...2271e-21     100     27     48GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
20P49695    742   PKWA_THECU Probable serine/threonine-protein ...2063e-25     113     36     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
21B5X3C4    410   LIS1B_SALSA Lissencephaly-1 homolog B OS=Salm...3143e-19     93.6     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
22Q4RJN5    410   LIS1_TETNG Lissencephaly-1 homolog OS=nigrovi...2110.000000000000003     81.3     30     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
23A7S338    409   LIS1_NEMVE Lissencephaly-1 homolog OS=Nematos...3141e-17     89     26     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
24Q803D2    410   LIS1B_DANRE Lissencephaly-1 homolog B OS=Dani...3142e-18     90.9     26     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0045176; P:apical protein localization; IMP:ZFIN.::GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0040023; P:establishment of nucleus localization; IMP:ZFIN.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045494; P:photoreceptor cell maintenance; IMP:ZFIN.::GO:0006810; P:transport; IEA:UniProtKB-KW.
25Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...860.008     42.4     27     49GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
26B5X3Z6    410   LIS1A_SALSA Lissencephaly-1 homolog A OS=Salm...3143e-17     87.4     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
27Q7T394    410   LIS1A_DANRE Lissencephaly-1 homolog A OS=Dani...3141e-17     88.6     26     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0048854; P:brain morphogenesis; IMP:ZFIN.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
28Q90ZL4    410   LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus...3143e-18     90.5     25     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
29Q6NZH4    410   LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus...3141e-18     91.3     25     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
30Q498M4    334   WDR5_RAT WD repeat-containing protein 5 OS=Ra...2472e-17     86.7     26     45GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0043984; P:histone H4-K16 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31P61965    334   WDR5_MOUSE WD repeat-containing protein 5 OS=...2472e-17     86.7     26     45GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.
GO:0043984; P:histone H4-K16 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001501; P:skeletal system development; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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