UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YCR072C

Length:

515

Number of sequences:

5887

Description:

YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
991	P87314	932	HIR1_SCHPO Protein hir1 OS=Schizosaccharomyce...	83	0.53	37	29	53	GO:0005829; C:cytosol; IDA:PomBase.::GO:0000417; C:HIR complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
									GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:PomBase.
									GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
992	P32479	840	HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...	30	0.2	38.1	53	73	GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
									GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
993	A2QHM1	308	SEC13_ASPNC Protein transport protein sec13 O...	175	5.2	33.1	23	41	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
994	Q9BQ67	446	GRWD1_HUMAN Glutamate-rich WD repeat-containi...	113	0.003	43.9	26	48	GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
995	Q5XX13	1052	FBW10_HUMAN F-box/WD repeat-containing protei...	144	0.011	42.4	27	46
996	Q640J6	313	WD82A_XENLA WD repeat-containing protein 82-A...	74	0.057	39.3	32	47	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
997	Q5XIG8	350	STRAP_RAT Serine-threonine kinase receptor-as...	214	0.0002	47	23	42	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
998	Q9Y0T2	1247	FBXA_DICDI F-box/WD repeat-containing protein...	92	0.025	41.2	35	51	GO:0019005; C:SCF ubiquitin ligase complex; IDA:dictyBase.
									GO:0005515; F:protein binding; IPI:dictyBase.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
									GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0045595; P:regulation of cell differentiation; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IMP:dictyBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
999	A2QEV8	337	EIF3I_ASPNC Eukaryotic translation initiation...	233	0.11	38.5	21	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
1000	P38262	535	SIF2_YEAST SIR4-interacting protein SIF2 OS=S...	96	0.0000006	55.8	26	57	GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.

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