Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
931Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...740.057     39.3     32     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
932Q7ZV55    325   EIF3I_DANRE Eukaryotic translation initiation...630.27     37.4     30     54GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
933Q5RBW3    925   CORO7_PONAB Coronin-7 OS=Pongo abelii (Sumatr...1070.014     42     26     48GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
934Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...990.86     35.8     19     49GO:0005737; C:cytoplasm; ISS:UniProtKB.
935Q60584    422   FBXW2_MOUSE F-box/WD repeat-containing protei...1160.007     42.7     28     47GO:0005737; C:cytoplasm; IDA:MGI.
936C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...1470.006     42.7     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
937Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...1470.006     42.7     29     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
938Q2UQ34    335   EIF3I_ASPOR Eukaryotic translation initiation...2638.9     32.3     17     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
939Q6CXX3    861   HIR1_KLULA Protein HIR1 OS=1267 / NRRL Y-1140...276.6     33.1     48     70GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
940Q6GNF1    360   SEH1B_XENLA Nucleoporin seh1-B OS=Xenopus lae...770.0006     45.8     32     57GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051315; P:attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007080; P:mitotic metaphase plate congression; ISS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
941Q5F201    620   WDR16_MOUSE WD repeat-containing protein 16 O...554.4     33.9     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
942Q66J51    325   EIF3I_XENLA Eukaryotic translation initiation...3070.01     41.6     20     35GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
943Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...990.28     37.4     19     52GO:0005737; C:cytoplasm; ISS:UniProtKB.
944P41838    352   RAE1_SCHPO Poly(A)+ RNA export protein OS=Sch...970.43     36.6     34     48GO:0055126; C:Nup82 complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:PomBase.::GO:0006606; P:protein import into nucleus; TAS:PomBase.::GO:0010389; P:regulation of G2/M transition of mitotic cell cycle; IMP:PomBase.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
945Q2UM42    572   CREC_ASPOR Probable catabolite repression pro...680.023     41.2     31     53
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
946B8N4F5    572   CREC_ASPFN Probable catabolite repression pro...680.023     41.2     31     53
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
947Q9ULV4    474   COR1C_HUMAN Coronin-1C OS=Homo sapiens (Human...1870.014     41.6     19     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0006909; P:phagocytosis; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
948Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...992.1     34.3     18     49GO:0005829; C:cytosol; IDA:RGD.
949A5DXE2    304   SEC13_LODEL Protein transport protein SEC13 O...2980.52     36.2     21     35GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
950Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...1100.23     37.4     19     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
951Q80T85    946   DCAF5_MOUSE DDB1- and CUL4-associated factor ...3290.0000002     57.4     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005739; C:mitochondrion; IDA:MGI.
952Q6NV31    313   WDR82_DANRE WD repeat-containing protein 82 O...760.025     40.4     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
953Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...991.8     34.7     18     49GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
954B2RZ17    454   FBXW2_RAT F-box/WD repeat-containing protein ...1160.006     42.7     28     47
955Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...677.6     32.7     33     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
956O88466    1888   ZF106_MOUSE Zinc finger protein 106 OS=Mus mu...2710.002     44.7     23     44GO:0005829; C:cytosol; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001515; F:opioid peptide activity; IPI:MGI.::GO:0017124; F:SH3 domain binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008286; P:insulin receptor signaling pathway; IDA:MGI.
957Q5B8Y3    336   EIF3I_EMENI Eukaryotic translation initiation...2330.25     37.4     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
958Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...740.12     38.1     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
959Q0V8F1    915   CORO7_BOVIN Coronin-7 OS=Bos taurus (Bovine)....1450.031     40.8     25     43GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
960Q91WG4    831   ELP2_MOUSE Elongator complex protein 2 OS=Mus...2770.69     36.6     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.::GO:0019901; F:protein kinase binding; IDA:MGI.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0046425; P:regulation of JAK-STAT cascade; IDA:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
961Q55E54    962   COROB_DICDI Coronin-B OS=Dictyostelium discoi...2090.041     40.4     21     43GO:0031252; C:cell leading edge; IDA:dictyBase.::GO:0042995; C:cell projection; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0005829; C:cytosol; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0001667; P:ameboidal cell migration; IMP:dictyBase.::GO:0031589; P:cell-substrate adhesion; IMP:dictyBase.::GO:0030866; P:cortical actin cytoskeleton organization; IMP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IDA:dictyBase.::GO:0031276; P:negative regulation of lateral pseudopodium assembly; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase.
records
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