Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q54J37    827   STRN_DICDI Striatin homolog OS=Dictyostelium ...1200.00002     51.2     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
902A8XEN7    554   DCA11_CAEBR DDB1- and CUL4-associated factor ...907.9     32.7     27     41
GO:0008340; P:determination of adult lifespan; ISS:UniProtKB.
903B4N0L0    322   EIF3I_DROWI Eukaryotic translation initiation...740.12     38.5     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
904Q4WTL0    460   CIAO1_ASPFU Probable cytosolic iron-sulfur pr...900.062     39.7     28     47
905B0XQ15    460   CIAO1_ASPFC Probable cytosolic iron-sulfur pr...900.062     39.7     28     47
906Q0CKB1    588   CREC_ASPTN Probable catabolite repression pro...680.02     41.2     31     53
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
907Q05BV3    1969   EMAL5_HUMAN Echinoderm microtubule-associated...535.6     33.5     42     57GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
908Q6ED65    1977   EMAL5_RAT Echinoderm microtubule-associated p...1176.7     33.5     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
909Q5ZMV7    313   WDR82_CHICK WD repeat-containing protein 82 O...740.11     38.5     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
910Q9WUM4    474   COR1C_MOUSE Coronin-1C OS=Mus musculus (Mouse...1870.007     42.7     20     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0000147; P:actin cortical patch assembly; TAS:MGI.::GO:0006909; P:phagocytosis; TAS:MGI.
911Q9NV06    445   DCA13_HUMAN DDB1- and CUL4-associated factor ...840.005     42.7     31     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
912P0CS50    339   SEC13_CRYNJ Protein transport protein SEC13 O...970.002     43.9     28     54GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
913P0CS51    339   SEC13_CRYNB Protein transport protein SEC13 O...970.002     43.9     28     54GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
914Q756D0    445   YTM1_ASHGO Ribosome biogenesis protein YTM1 O...2331.1     35.4     23     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
915Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...2870.0007     45.4     20     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
916B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...2870.0007     45.4     20     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
917Q2HJ56    500   PWP1_BOVIN Periodic tryptophan protein 1 homo...780.055     39.7     32     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
918Q5EBE8    325   EIF3I_XENTR Eukaryotic translation initiation...750.002     44.3     35     49GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
919P73595    334   Y1410_SYNY3 Uncharacterized WD repeat-contain...3070.0002     47     22     40GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
920Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...1283.8     33.9     30     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
921Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...1730.051     40     23     41GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
922Q68FJ6    363   PK1IP_XENLA p21-activated protein kinase-inte...1180.033     40     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
923A4R7U3    446   CIAO1_MAGO7 Probable cytosolic iron-sulfur pr...2230.0001     48.1     26     40
924Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...1520.003     44.3     22     47
925Q54N86    1178   FBXAL_DICDI F-box/WD repeat-containing protei...823.5     34.3     27     51
GO:0005488; F:binding; IEA:InterPro.
926Q5R4T8    445   DCA13_PONAB DDB1- and CUL4-associated factor ...840.006     42.7     31     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
927Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...1901.2     35.4     19     41GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
928Q6TNS2    368   PK1IP_DANRE p21-activated protein kinase-inte...1163     33.9     24     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
929Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...1293.3     33.9     28     42
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
930Q96JK2    942   DCAF5_HUMAN DDB1- and CUL4-associated factor ...3290.0000001     58.5     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
931Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...740.057     39.3     32     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
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