Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841O22607    507   MSI4_ARATH WD-40 repeat-containing protein MS...1420.000006     52.4     30     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0046872; F:metal ion binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
842Q54ED4    482   GRWD1_DICDI Glutamate-rich WD repeat-containi...1630.031     40.4     24     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
843A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...555.1     33.9     31     51
844Q6NS57    1503   MABP1_MOUSE Mitogen-activated protein kinase-...1180.73     36.6     28     44
GO:0005515; F:protein binding; IPI:MGI.
GO:0007256; P:activation of JNKK activity; IDA:MGI.
845Q9XW12    337   CIAO1_CAEEL Probable cytosolic iron-sulfur pr...3320.0004     46.2     23     39
GO:0005515; F:protein binding; IPI:IntAct.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0000003; P:reproduction; IMP:WormBase.
846A8PWQ8    356   CIAO1_MALGO Probable cytosolic iron-sulfur pr...2228.4     32.7     21     39
847Q04726    772   TLE3_HUMAN Transducin-like enhancer protein 3...1600.0002     47.4     23     44GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
848Q08122    772   TLE3_MOUSE Transducin-like enhancer protein 3...1600.0002     47.4     23     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
849Q6P3H7    424   RBBP4_DANRE Histone-binding protein RBBP4 OS=...1870.00007     48.9     24     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
850Q9JIT3    764   TLE3_RAT Transducin-like enhancer protein 3 O...1600.0003     47.4     23     44GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
851Q75C99    423   HAT2_ASHGO Histone acetyltransferase type B s...1790.0000001     57.4     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
852Q5EBD9    824   ELP2_XENTR Elongator complex protein 2 OS=Xen...4580.0000002     57.8     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
853Q9SU78    487   MSI5_ARATH WD-40 repeat-containing protein MS...691.6     35     32     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
854Q12024    460   YTM1_YEAST Ribosome biogenesis protein YTM1 O...3320.001     45.4     22     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051276; P:chromosome organization; IGI:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
855A6ZPA9    460   YTM1_YEAS7 Ribosome biogenesis protein YTM1 O...3320.001     45.4     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
856P90794    571   DCA11_CAEEL DDB1- and CUL4-associated factor ...940.74     36.2     24     41GO:0005634; C:nucleus; IDA:WormBase.
GO:0008134; F:transcription factor binding; IPI:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:WormBase.::GO:0080135; P:regulation of cellular response to stress; IMP:WormBase.
857Q08924    1013   WDR6_YEAST Regulator of Ty1 transposition pro...2930.017     41.6     22     37GO:0005768; C:endosome; IDA:SGD.
GO:0032456; P:endocytic recycling; IMP:SGD.
858O94244    430   HAT2_SCHPO Histone acetyltransferase type B s...2230.000005     52.8     25     41GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031511; C:Mis6-Sim4 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0051382; P:kinetochore assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0034501; P:protein localization to kinetochore; IGI:PomBase.::GO:0031066; P:regulation of histone deacetylation at centromere; IMP:PomBase.
859Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...750.021     41.2     32     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
860B3MVL6    322   EIF3I_DROAN Eukaryotic translation initiation...2870.002     43.9     20     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
861Q8SRK1    384   HAT2_ENCCU Histone acetyltransferase type B s...1700.0003     46.6     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
862Q7ZTY4    426   RBBP7_DANRE Histone-binding protein RBBP7 OS=...1890.0001     48.1     23     44GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
863Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...1117     33.1     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
864P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1223.4     34.3     25     43
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
865Q7RXH4    346   EIF3I_NEUCR Eukaryotic translation initiation...830.062     39.3     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
866P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...498.3     32.7     33     55
867P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1360.00008     48.1     28     48GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
868Q8BFQ4    313   WDR82_MOUSE WD repeat-containing protein 82 O...740.065     39.3     32     47GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
869Q6UXN9    313   WDR82_HUMAN WD repeat-containing protein 82 O...740.065     39.3     32     47GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; IDA:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.
870Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...1900.56     36.6     22     42GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
871Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...992     34.7     18     49
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
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