Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781B0BNA7    325   EIF3I_RAT Eukaryotic translation initiation f...750.005     42.7     33     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
782Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...556.5     33.1     27     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
783Q7K0L4    630   WDR26_DROME WD repeat-containing protein 26 h...891.1     35.8     31     45GO:0005737; C:cytoplasm; ISS:UniProtKB.
784Q13347    325   EIF3I_HUMAN Eukaryotic translation initiation...750.005     42.7     33     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
785Q9QZD9    325   EIF3I_MOUSE Eukaryotic translation initiation...750.005     42.7     33     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
786Q5E966    325   EIF3I_BOVIN Eukaryotic translation initiation...750.005     42.7     33     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
787Q54KM3    754   CDH1_DICDI Anaphase-promoting complex subunit...1450.57     36.6     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
788Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1050.016     41.2     30     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
789Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...1790.43     37     23     45
790Q7ZVL2    779   WDR24_DANRE WD repeat-containing protein 24 O...1322.6     34.7     24     37
791Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...1490.0000002     57.4     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
792A7TLU2    347   CIAO1_VANPO Probable cytosolic iron-sulfur pr...1700.71     35.8     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
793O13168    535   TLE1_DANRE Protein groucho-1 OS=Danio rerio (...1600.0003     47     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
794Q54IY5    1276   GEMI5_DICDI Component of gems protein 5 OS=Di...1411.8     35     24     42GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
795Q6FVD3    840   HIR1_CANGA Protein HIR1 OS=NRRL Y-65) (Yeast)...270.069     39.7     59     78GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
796B4LUA5    322   EIF3I_DROVI Eukaryotic translation initiation...740.24     37.4     26     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
797Q7ZX22    780   WDR24_XENLA WD repeat-containing protein 24 O...2090.93     35.8     22     41
798Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...1790.42     37     23     45
799Q62441    773   TLE4_MOUSE Transducin-like enhancer protein 4...2950.045     40     22     40GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
800Q04727    773   TLE4_HUMAN Transducin-like enhancer protein 4...2950.046     40     22     40GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
801Q9W328    313   LST8_DROME Protein LST8 homolog OS=Drosophila...3230.037     40     22     42GO:0005737; C:cytoplasm; ISS:UniProtKB.
802Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...3610.000009     51.6     22     40GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
803Q7Z4S6    1674   KI21A_HUMAN Kinesin-like protein KIF21A OS=Ho...3470.01     42.4     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
804Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...750.005     42.7     33     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
805Q04725    743   TLE2_HUMAN Transducin-like enhancer protein 2...2590.13     38.9     21     40GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
806A6H603    1563   NWD1_MOUSE NACHT and WD repeat domain-contain...1680.84     36.2     23     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
807A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...2050.028     40.8     21     41
808Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...1210.36     37     23     42
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
809Q5ZK69    392   PAAF1_CHICK Proteasomal ATPase-associated fac...840.2     37.7     31     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
810Q9UT57    608   CFD1_SCHPO Probable cytosolic Fe-S cluster as...1490.002     44.7     26     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
811A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...2610.25     37.4     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
records
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