Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YCR072C
Length:
515
Number of sequences:
5887
Description:
YCR072C RSA4 SGDID:S000000668, Chr III from 242352-240805, Genome Release 64-1-1, reverse complement, Verified ORF, "WD-repeat protein involved in ribosome biogenesis; may interact with ribosomes; required for maturation and efficient intra-nuclear transport or pre-60S ribosomal subunits, localizes to the nucleolus"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751Q5SUS0    1030   FBW10_MOUSE F-box/WD repeat-containing protei...1500.003     44.3     28     49
752P39946    494   LIS1_YEAST Nuclear distribution protein PAC1 ...1530.027     40.8     25     49GO:0005881; C:cytoplasmic microtubule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051010; F:microtubule plus-end binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030473; P:nuclear migration along microtubule; IMP:SGD.
753A6ZPA6    494   LIS1_YEAS7 Nuclear distribution protein PAC1 ...1530.027     40.8     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
754O17468    1047   HIRA_DROME Protein HIRA homolog OS=Drosophila...1140.0000002     57.4     30     49GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.
GO:0006336; P:DNA replication-independent nucleosome assembly; IMP:FlyBase.::GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
755Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...1900.00001     51.2     28     44
756Q0USG2    443   CIAO1_PHANO Probable cytosolic iron-sulfur pr...1780.002     44.7     25     44
757Q94BR4    523   PR19A_ARATH Pre-mRNA-processing factor 19 hom...1930.00001     51.6     23     41GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
758Q5ZMV9    705   WDR24_CHICK WD repeat-containing protein 24 O...1430.37     37.4     24     38
759Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...860.16     38.5     29     49GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
760C8ZH19    494   LIS1_YEAS8 Nuclear distribution protein PAC1 ...1530.038     40.4     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
761Q24338    425   ESC_DROME Polycomb protein esc OS=Drosophila ...940.46     36.6     23     49GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IMP:FlyBase.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
762Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...11710     32.7     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
763Q86HX1    1114   HIRA_DICDI Protein HIRA OS=Dictyostelium disc...2730.0007     46.2     21     38GO:0005634; C:nucleus; ISS:dictyBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0003714; F:transcription corepressor activity; ISS:dictyBase.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
764A8XL02    446   WDR12_CAEBR Ribosome biogenesis protein WDR12...636.2     33.1     30     51GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
765Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...3070.00007     49.3     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
766Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...1370.53     36.6     23     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
767P93471    672   COP1_PEA E3 ubiquitin-protein ligase COP1 OS=...1470.004     43.5     22     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
768B4JB43    326   EIF3I_DROGR Eukaryotic translation initiation...740.12     38.5     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
769Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...1790.43     37     23     45
770Q7ZW33    517   UTP15_DANRE U3 small nucleolar RNA-associated...1370.98     35.8     26     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
771Q0UNA9    302   SEC13_PHANO Protein transport protein SEC13 O...1913.3     33.9     19     31GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
772Q8CFJ9    790   WDR24_MOUSE WD repeat-containing protein 24 O...1370.6     36.6     27     43
773Q11176    611   WDR1_CAEEL Actin-interacting protein 1 OS=Cae...4490.004     43.5     22     37GO:0042643; C:actomyosin, actin part; IDA:WormBase.::GO:0030016; C:myofibril; IDA:WormBase.::GO:0016528; C:sarcoplasm; IDA:WormBase.
GO:0051015; F:actin filament binding; IDA:WormBase.
GO:0051016; P:barbed-end actin filament capping; ISS:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0030836; P:positive regulation of actin filament depolymerization; IDA:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.
774Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...1570.006     42.7     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
775Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...790.0004     46.6     35     53GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
776Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...1580.003     43.9     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
777O42469    767   TLE1_XENLA Transducin-like enhancer protein 1...2590.017     41.6     22     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
778Q8LPL5    481   FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabido...1740.00003     50.1     25     43
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
779Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...2430.16     38.5     21     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
780O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...1090.11     38.9     23     46GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
781B0BNA7    325   EIF3I_RAT Eukaryotic translation initiation f...750.005     42.7     33     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
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